RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MARCH9Q86YJ5 346 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 BBS5Q8N3I7 341 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 MDM1Q8TC05 714 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 ECHDC3Q96DC8 303 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 TBATAQ96M53 351 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 PCDH18Q9HCL0 1135 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 SPASTQ9UBP0 616 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 A0A1W2PQ67 120 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 K7ESM1 405 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 GP1BAP07359 652 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 C6P13671 934 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 AMPD1P23109 780 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 LIG3P49916 1009 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 SCNN1BP51168 640 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 EIF2B5Q13144 721 aaKnown RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 KRT81Q14533 505 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 IRF4Q15306 451 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 ZCCHC8Q6NZY4 707 aaKnown RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 LRRC49Q8IUZ0 686 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 ZNF564Q8TBZ8 553 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 NSMCE1Q8WV22 266 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 SPOCK2Q92563 424 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 NXPE2Q96DL1 559 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 BTBD6Q96KE9 485 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 APOLD1Q96LR9 279 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 SLC13A1Q9BZW2 595 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 MBNL1Q9NR56 388 aaKnown RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 ZNHIT6Q9NWK9 470 aaKnown RBP19.22■□□□□ 0.67
COL7A1-207ENST00000467985 UVRAGQ9P2Y5 699 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 NENFQ9UMX5 172 aa19.22■□□□□ 0.67
COL7A1-207ENST00000467985 GOLGA6L3A6NEY3 463 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TPP1O14773 563 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 LZTS3O60299 673 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TPM1P09493 284 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 HTR1BP28222 390 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 EIF4A3P38919 411 aaKnown RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 SSR1P43307 286 aaKnown RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 BLKP51451 505 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 CDH6P55285 790 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 CYP4F3Q08477 520 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 SLC10A7Q0GE19 358 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TARDBPQ13148 414 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 SLC18A3Q16572 532 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TSR1Q2NL82 804 aaKnown RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 RALGPS1Q5JS13 557 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TPRG1LQ5T0D9 272 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 TXNRD3NBQ6F5E7 133 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 ATPAF2Q8N5M1 289 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 OR8K1Q8NGG5 319 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 ATL2Q8NHH9 583 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 DNAJC7Q99615 494 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 IL12RB2Q99665 862 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 ETNK2Q9NVF9 386 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 CTTNBP2NLQ9P2B4 639 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 APOBEC3BQ9UH17 382 aaKnown RBP19.21■□□□□ 0.67
COL7A1-207ENST00000467985 KLF15Q9UIH9 416 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 SALL4Q9UJQ4 1053 aa19.21■□□□□ 0.67
COL7A1-207ENST00000467985 ANKRD36A6QL64 1941 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 MAFKO60675 156 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 SOCS5O75159 536 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 NEBLO76041 1014 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 H2AFZP0C0S5 128 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 NFKBIAP25963 317 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 INSM1Q01101 510 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-207ENST00000467985 WSCD2Q2TBF2 565 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 H2AFVQ71UI9 128 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 ZSWIM9Q86XI8 627 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 TP53INP2Q8IXH6 220 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 PHACTR4Q8IZ21 702 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 FAM71BQ8TC56 605 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 LMX1AQ8TE12 382 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 GLMNQ92990 594 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 NRSN2Q9GZP1 204 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 DEF6Q9H4E7 631 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 CLCA2Q9UQC9 943 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 COQ6Q9Y2Z9 468 aa19.2■□□□□ 0.66
COL7A1-207ENST00000467985 LRRK1Q38SD2 2015 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 SSU72P8A0A1W2PR75 194 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 LMO7DNF2Z398 122 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 TRAFD1O14545 582 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-207ENST00000467985 MUSKO15146 869 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 PROSCO94903 275 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 PEX11BO96011 259 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 ELFN1P0C7U0 828 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 PPARDQ03181 441 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 MTM1Q13496 603 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 PRRT3Q5FWE3 981 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 FAXCQ5TGI0 409 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 MARC1Q5VT66 337 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 KDM7AQ6ZMT4 941 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 DPPA4Q7L190 304 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 MAP7D3Q8IWC1 876 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 FSTL5Q8N475 847 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-207ENST00000467985 DCBLD1Q8N8Z6 715 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 NUDCD1Q96RS6 583 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 SCUBE2Q9NQ36 999 aa19.19■□□□□ 0.66
COL7A1-207ENST00000467985 HTRA2O43464 458 aaPredicted RBP19.18■□□□□ 0.66
COL7A1-207ENST00000467985 KRT7P08729 469 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms