RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KCTD11Q693B1 232 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 ERAP2Q6P179 960 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 FAM124AQ86V42 546 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 PAF1Q8N7H5 531 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 CADM4Q8NFZ8 388 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 OR2T34Q8NGX1 318 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 OR14C36Q8NHC7 312 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 CCHCR1Q8TD31 782 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 PDCD6IPQ8WUM4 868 aaKnown RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 IFT43Q96FT9 208 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 MCCC1Q96RQ3 725 aaPredicted RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 UBP1Q9NZI7 540 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 CHKBQ9Y259 395 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 LRRK1Q38SD2 2015 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 TNRC6BQ9UPQ9 1833 aaKnown RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 A0A0J9YYE9 177 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 ANKRD66B4E2M5 251 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
GPC1-207ENST00000466624 SPINT1O43278 529 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 HRO43593 1189 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 NDUFS2O75306 463 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 PMPCBO75439 489 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 NDST3O95803 873 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 TRBC1P01850 177 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 ZSCAN5DPP0CG00 497 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 HLA-DPA1P20036 260 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 ADRA1AP35348 466 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 PTGIRP43119 386 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 TNNT3P45378 269 aaPredicted RBP16.09■□□□□ 0.17
GPC1-207ENST00000466624 PTPN5P54829 565 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 PTK6Q13882 451 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 USP45Q70EL2 814 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 KLHL7Q8IXQ5 586 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 FAM160A2Q8N612 972 aaPredicted RBP16.09■□□□□ 0.17
GPC1-207ENST00000466624 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 SCRN2Q96FV2 425 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 ZC3H10Q96K80 434 aaKnown RBP16.09■□□□□ 0.17
GPC1-207ENST00000466624 LYSMD1Q96S90 227 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 FSD1LQ9BXM9 530 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 LRRC40Q9H9A6 602 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 ETNK1Q9HBU6 452 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 PCDH12Q9NPG4 1184 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 EIF2B3Q9NR50 452 aaKnown RBP16.09■□□□□ 0.17
GPC1-207ENST00000466624 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 CACNA1HO95180 2353 aa16.09■□□□□ 0.17
GPC1-207ENST00000466624 F5H423 210 aaPredicted RBP16.08■□□□□ 0.16
GPC1-207ENST00000466624 H0Y858 1186 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 AP2A1O95782 977 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 CYP2A6P11509 494 aaPredicted RBP16.08■□□□□ 0.16
GPC1-207ENST00000466624 MMP12P39900 470 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 EPHB1P54762 984 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 DR1Q01658 176 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 PCSK7Q16549 785 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 TMEM52BQ4KMG9 183 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 RANBP10Q6VN20 620 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 DPPA4Q7L190 304 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 TRIM69Q86WT6 500 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 ABCA7Q8IZY2 2146 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 FRMD1Q8N878 549 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 LPCAT1Q8NF37 534 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 IPMKQ8NFU5 416 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 FOXJ1Q92949 421 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 SRPK1Q96SB4 655 aaKnown RBP16.08■□□□□ 0.16
GPC1-207ENST00000466624 GPR174Q9BXC1 333 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
GPC1-207ENST00000466624 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.16
GPC1-207ENST00000466624 CAPN8A6NHC0 703 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 MAP3K13O43283 966 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 SUN1O94901 812 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 FGF1P05230 155 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
GPC1-207ENST00000466624 BCKDHBP21953 392 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 MAGEA6P43360 314 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 CCR5P51681 352 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
GPC1-207ENST00000466624 C2orf54Q08AI8 447 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 PPP1R7Q15435 360 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 SLC1A5Q15758 541 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 QPCTQ16769 361 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 FAXCQ5TGI0 409 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 PMS2CLQ68D20 193 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 LINC00523Q86TU6 105 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 RAVER1Q8IY67 606 aaKnown RBP16.07■□□□□ 0.16
GPC1-207ENST00000466624 PDCD7Q8N8D1 485 aaKnown RBP16.07■□□□□ 0.16
GPC1-207ENST00000466624 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 KRT12Q99456 494 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 TBL1YQ9BQ87 522 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 INVSQ9Y283 1065 aa16.07■□□□□ 0.16
GPC1-207ENST00000466624 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
GPC1-207ENST00000466624 PLXNA2O75051 1894 aa16.06■□□□□ 0.16
GPC1-207ENST00000466624 TBC1D3DA0A087WVF3 549 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms