RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 Q6ZS52 159 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 KIAA0907Q7Z7F0 614 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 LCA5Q86VQ0 697 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 SLC26A11Q86WA9 606 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 LRRC6Q86X45 466 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FAM72BQ86X60 149 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 ZNF683Q8IZ20 524 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 KIRREL3Q8IZU9 778 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 PYROXD2Q8N2H3 581 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FITM2Q8N6M3 262 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 GPATCH11Q8N954 259 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 DCAF4L2Q8NA75 395 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 KDM1BQ8NB78 822 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 TXNDC5Q8NBS9 432 aaKnown RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 TSTD1Q8NFU3 115 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 WFDC5Q8TCV5 224 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 ZNF75CPQ92670 426 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 CDKL2Q92772 493 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 TTC17Q96AE7 1141 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 MCUR1Q96AQ8 359 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 MYEOVQ96EZ4 313 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 NSL1Q96IY1 281 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 KCTD15Q96SI1 283 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 PAIP2Q9BPZ3 127 aaKnown RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 ZNF670Q9BS34 389 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 BTBD10Q9BSF8 475 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 SPON2Q9BUD6 331 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FAM126AQ9BYI3 521 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 MANSC1Q9H8J5 431 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FBRSQ9HAH7 460 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 RNPEPL1Q9HAU8 725 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 LRRC4CQ9HCJ2 640 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 CD248Q9HCU0 757 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 THAP10Q9P2Z0 257 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 SUN2Q9UH99 717 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 ZFP69BQ9UJL9 534 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FBXO4Q9UKT5 387 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 CORO1CQ9ULV4 474 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 CLEC4EQ9ULY5 219 aa10.13□□□□□ -0.79
PMF1-204ENST00000466489 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
PMF1-204ENST00000466489 CKAP5Q14008 2032 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 GOLGA8QA0A0J9YX86 632 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 CXorf51AA0A1B0GTR3 108 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 GOLGA8OA6NCC3 632 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 WASH4PA8MWX3 477 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 GOLGA8NF8WBI6 632 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 CBX4O00257 560 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 TYROBPO43914 113 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 PAPSS2O95340 614 aaPredicted RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 APBB3O95704 486 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 MLNP12872 115 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 IL1R2P27930 398 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 HADHAP40939 763 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 MAGEA6P43360 314 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 NDST2P52849 883 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 IRX1P78414 480 aaPredicted RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 FZD5Q13467 585 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 ZNF234Q14588 700 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 ACCSLQ4AC99 568 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 FSCBQ5H9T9 825 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 EGFLAMQ63HQ2 1017 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 KYAT3Q6YP21 454 aaKnown RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 ADIPOR2Q86V24 386 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 CCDC33Q8N5R6 958 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 IL17RCQ8NAC3 791 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 MGARPQ8TDB4 240 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 NSMCE1Q8WV22 266 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 PRCCQ92733 491 aaPredicted RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 ZBTB9Q96C00 473 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 RTP4Q96DX8 246 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 PPP1R2P1Q96PQ5 205 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 WWP1Q9H0M0 922 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 PCDH18Q9HCL0 1135 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 DLGAP2Q9P1A6 1054 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 DNPEPQ9ULA0 475 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 RAD54BQ9Y620 910 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 STON1Q9Y6Q2 735 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 NYNRINQ9P2P1 1898 aaKnown RBP10.12□□□□□ -0.79
PMF1-204ENST00000466489 SHROOM3Q8TF72 1996 aa10.12□□□□□ -0.79
PMF1-204ENST00000466489 EDDM13A0A1B0GTR0 161 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 HACD1B0YJ81 288 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 POC1B-GALNT4F8VUJ3 575 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 GYG2O15488 501 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 RNASEH1O60930 286 aaKnown RBP10.11□□□□□ -0.79
PMF1-204ENST00000466489 CIB2O75838 187 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 KLHL2O95198 593 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 EPHX1P07099 455 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 TCF4P15884 667 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 ERCC2P18074 760 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 KDELR1P24390 212 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 GRK2P25098 689 aa10.11□□□□□ -0.79
PMF1-204ENST00000466489 MZF1P28698 734 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms