RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RENBPP51606 427 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 VAV2P52735 878 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 DSC2Q02487 901 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 GALNT2Q10471 571 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 AP1B1Q10567 949 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC10A2Q12908 348 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 SGCGQ13326 291 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 GRM3Q14832 879 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 IFI16Q16666 785 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 CCDC157Q569K6 752 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 DENND2CQ68D51 928 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 TIGD7Q6NT04 549 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 ERAP2Q6P179 960 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 NEK5Q6P3R8 708 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 MFSD7Q6UXD7 560 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 ERMP1Q7Z2K6 904 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 TMEM139Q8IV31 216 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 NAXDQ8IW45 347 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 C17orf53Q8N3J3 647 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 OR13H1Q8NG92 308 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 TPCN2Q8NHX9 752 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 KRT35Q92764 455 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 RAB7BQ96AH8 199 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 FAF2Q96CS3 445 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 KLHDC7BQ96G42 594 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 NSMCE3Q96MG7 304 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF599Q96NL3 588 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 PSKH2Q96QS6 385 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 ELF4Q99607 663 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC17A9Q9BYT1 436 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 CPEB1Q9BZB8 566 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 LACRTQ9GZZ8 138 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 L2HGDHQ9H9P8 463 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 PCDH12Q9NPG4 1184 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 DTLQ9NZJ0 730 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 LRP4O75096 1905 aa9.82□□□□□ -0.84
RTFDC1-205ENST00000466260 SPTBN4Q9H254 2564 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 A0A0A6YYK5 440 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 C3orf70A6NLC5 250 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 A6NNZ2 444 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 KCNK1O00180 336 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 PSTPIP1O43586 416 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 LZTS3O60299 673 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 PEX11BO96011 259 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 PCCBP05166 539 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 HLA-DQB2P05538 268 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 ITGAVP06756 1048 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 CCDC175P0C221 793 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 CTPS1P17812 591 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 NXPH1P58417 271 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 AP1S1P61966 158 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 ELP6Q0PNE2 266 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 TRAF2Q12933 501 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 FOXC1Q12948 553 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 UGP2Q16851 508 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 TMEM259Q4ZIN3 620 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF542PQ5EBM4 170 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 N4BP2L1Q5TBK1 243 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 C11orf63Q6NUN7 778 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 SPOCD1Q6ZMY3 1216 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 SPATS2Q86XZ4 545 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 CCDC13Q8IYE1 715 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 PLD5Q8N7P1 536 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 MFSD2AQ8NA29 543 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 RHBDD1Q8TEB9 315 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF592Q92610 1267 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 NUDCD1Q96RS6 583 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 TUBGCP5Q96RT8 1024 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 LGMNQ99538 433 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 SEMA3CQ99985 751 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 MGME1Q9BQP7 344 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 NOD2Q9HC29 1040 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 RBM22Q9NW64 420 aaKnown RBP eCLIP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 SAE1Q9UBE0 346 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 DKK3Q9UBP4 350 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 TPX2Q9ULW0 747 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 BTBD3Q9Y2F9 522 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 ATP8A1Q9Y2Q0 1164 aa9.81□□□□□ -0.84
RTFDC1-205ENST00000466260 A0A1B0GTQ1 180 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 POM121BA6NF01 834 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 C10orf142B7Z368 130 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 F5H423 210 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 FPGTO14772 594 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 AREL1O15033 823 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 MATN3O15232 486 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CST8O60676 142 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 MAGEC1O60732 1142 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 C6P13671 934 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CCNB1P14635 433 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 PECAM1P16284 738 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CR2P20023 1033 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 MX2P20592 715 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CSRP1P21291 193 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CCNCP24863 283 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 IGFALSP35858 605 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms