RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MBL2P11226 248 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 H2AFXP16104 143 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 IVDP26440 423 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 VIPR1P32241 457 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CA8P35219 290 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 GJC1P36383 396 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CCR2P41597 374 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MAGEA6P43360 314 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 KCNJ1P48048 391 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 NRIP1P48552 1158 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 KCNQ1P51787 676 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CDR1P51861 262 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 EIF3EP60228 445 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ZXDBP98169 803 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 DR1Q01658 176 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 PPIDQ08752 370 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 HYAL1Q12794 435 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 SLC12A1Q13621 1099 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 PRKD1Q15139 912 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 SLC45A4Q5BKX6 768 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 FAM133BQ5BKY9 247 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 SPDYCQ5MJ68 293 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 PIK3R6Q5UE93 754 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 TXNDC8Q6A555 127 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ANKRD54Q6NXT1 300 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 FBXL22Q6P050 247 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 SYCE2Q6PIF2 218 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 RHBDF2Q6PJF5 856 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 ATG14Q6ZNE5 492 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 C14orf80Q86SX3 495 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 SETD3Q86TU7 594 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CDKL3Q8IVW4 592 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ARHGAP12Q8IWW6 846 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 KLHL7Q8IXQ5 586 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CMTM8Q8IZV2 173 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 ARL14EPQ8N8R7 260 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 NUP43Q8NFH3 380 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 ZSCAN18Q8TBC5 510 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 TFB1MQ8WVM0 346 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 E2F7Q96AV8 911 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 LRRC45Q96CN5 670 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MRGPRX3Q96LB0 322 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 FERMT1Q9BQL6 677 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 NACA2Q9H009 215 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MAGEH1Q9H213 219 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 S1PR5Q9H228 398 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 ADAM7Q9H2U9 754 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 EPB41L5Q9HCM4 733 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 GKN1Q9NS71 199 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 TDP1Q9NUW8 608 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 COX16Q9P0S2 106 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 PAK5Q9P286 719 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 LSM7Q9UK45 103 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 AGO1Q9UL18 857 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ZNF148Q9UQR1 794 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 TBC1D30Q9Y2I9 924 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 R3HDM2Q9Y2K5 976 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ZFP37Q9Y6Q3 630 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 DOCK4Q8N1I0 1966 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MYO16Q9Y6X6 1858 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MYO7AQ13402 2215 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 NUP205Q92621 2012 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ILVBLA1L0T0 632 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 H7C0C1 242 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 LEFTY2O00292 366 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 DNALI1O14645 258 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 SLC9A3R1O14745 358 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 PSMD3O43242 534 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MAFKO60675 156 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 ERLIN1O75477 346 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 KCNH1O95259 989 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 GLP2RO95838 553 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 KRT14P02533 472 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MYL4P12829 197 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PNLIPP16233 465 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 TACR1P25103 407 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 RBL1P28749 1068 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CORO1AP31146 461 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 ACTN2P35609 894 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 FDFT1P37268 417 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 GARSP41250 739 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 ATP5OP48047 213 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 IFNAR2P48551 515 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PLK1P53350 603 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 CDK16Q00536 496 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 GBE1Q04446 702 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 FZD5Q13467 585 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 HNRNPDQ14103 355 aaKnown RBP5.59□□□□□ -1.51
VPS41-211ENST00000466017 ELF2Q15723 593 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PARP6Q2NL67 630 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 PARP15Q460N3 678 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MAP9Q49MG5 647 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 MPPE1Q53F39 396 aa5.59□□□□□ -1.51
VPS41-211ENST00000466017 TEX44Q53QW1 395 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms