RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 IGSF6O95976 241 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 PRNPP04156 253 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 C1SP09871 688 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 MAT2AP31153 395 aaKnown RBP17.92■□□□□ 0.46
COL7A1-205ENST00000465238 GARSP41250 739 aaKnown RBP17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CCNHP51946 323 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-205ENST00000465238 RAD51Q06609 339 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CCDC15Q0P6D6 951 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CAMK2BQ13554 666 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 STAT4Q14765 748 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 POM121L1PQ3SYA9 428 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 TMPRSS12Q86WS5 348 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 BBS5Q8N3I7 341 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 PDCD7Q8N8D1 485 aaKnown RBP17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CHST14Q8NCH0 376 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CCNYQ8ND76 341 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 TMIEQ8NEW7 156 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 GDAP1L1Q96MZ0 367 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CINPQ9BW66 212 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-205ENST00000465238 DTLQ9NZJ0 730 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 IL36AQ9UHA7 158 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 CELSR3Q9NYQ7 3312 aa17.92■□□□□ 0.46
COL7A1-205ENST00000465238 PRAMEF26H0Y7S4 382 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 RNGTTO60942 597 aaKnown RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 POP4O95707 220 aaKnown RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 SLC10A2Q12908 348 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 LBRQ14739 615 aaKnown RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 MYLK3Q32MK0 819 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 ARSIQ5FYB1 569 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 ATXN7L2Q5T6C5 722 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 TIGD7Q6NT04 549 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 NEK5Q6P3R8 708 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 BZW1Q7L1Q6 419 aaKnown RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 SPATS2Q86XZ4 545 aaKnown RBP17.91■□□□□ 0.46
COL7A1-205ENST00000465238 EID2Q8N6I1 236 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 TRIM58Q8NG06 486 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 GRIN3AQ8TCU5 1115 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 ALG3Q92685 438 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 HES6Q96HZ4 224 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 TSGA13Q96PP4 275 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 HEMGNQ9BXL5 484 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 LHX3Q9UBR4 397 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 SEPT3Q9UH03 358 aa17.91■□□□□ 0.46
COL7A1-205ENST00000465238 FAM149AA5PLN7 773 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-205ENST00000465238 KRIT1O00522 736 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 DDX3YO15523 660 aaKnown RBP17.9■□□□□ 0.46
COL7A1-205ENST00000465238 RFPL3O75679 317 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 CTSLP07711 333 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 TGM2P21980 687 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 CCNCP24863 283 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 NR2C2P49116 596 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 RENBPP51606 427 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 TAS2R38P59533 333 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 SLC10A7Q0GE19 358 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 BNIP3Q12983 259 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 ZNF235Q14590 738 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 PDK1Q15118 436 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 PIP5KL1Q5T9C9 394 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 MARC1Q5VT66 337 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 NPNTQ6UXI9 565 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 MARCH9Q86YJ5 346 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 OR6K2Q8NGY2 324 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 P3H4Q92791 437 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 OSBPL8Q9BZF1 889 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 ZDHHC6Q9H6R6 413 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 DYRK4Q9NR20 520 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 EFR3BQ9Y2G0 817 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 RAXQ9Y2V3 346 aa17.9■□□□□ 0.46
COL7A1-205ENST00000465238 PPP1R12AO14974 1030 aaPredicted RBP17.89■□□□□ 0.45
COL7A1-205ENST00000465238 MATN3O15232 486 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 LEFTY1O75610 366 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 NEBLO76041 1014 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 PYGMP11217 842 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 HNF1BP35680 557 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 ACADVLP49748 655 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 CYP4F3Q08477 520 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 DNAJC3Q13217 504 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 RPS6KA1Q15418 735 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 MEI1Q5TIA1 1274 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 C19orf48Q6RUI8 117 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 BBS12Q6ZW61 710 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 KANSL1Q7Z3B3 1105 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 CCDC13Q8IYE1 715 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 TSEN2Q8NCE0 465 aaKnown RBP17.89■□□□□ 0.45
COL7A1-205ENST00000465238 HDAC11Q96DB2 347 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 PPP1R16AQ96I34 528 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 LRIG1Q96JA1 1093 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 EXOC2Q96KP1 924 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 PSKH2Q96QS6 385 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 BRD8Q9H0E9 1235 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 TRMT1Q9NXH9 659 aaKnown RBP17.89■□□□□ 0.45
COL7A1-205ENST00000465238 WASF2Q9Y6W5 498 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 IGSF10Q6WRI0 2623 aa17.89■□□□□ 0.45
COL7A1-205ENST00000465238 TJP3O95049 919 aa17.88■□□□□ 0.45
COL7A1-205ENST00000465238 PEX11BO96011 259 aa17.88■□□□□ 0.45
COL7A1-205ENST00000465238 PTPN7P35236 360 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms