RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TSPAN33Q86UF1 283 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 ZCCHC9Q8N567 271 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 FATE1Q969F0 183 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 ECHDC3Q96DC8 303 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 IMP4Q96G21 291 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 HDAC8Q9BY41 377 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 SGK2Q9HBY8 427 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 KCND1Q9NSA2 647 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 RAB23Q9ULC3 237 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 IGLON5A6NGN9 336 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 NPIPB15A6NHN6 443 aaPredicted RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 H0Y8X5 98 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 PGRMC1O00264 195 aaKnown RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 USP12O75317 370 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 METTL18O95568 372 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 CPP00450 1065 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 C7P10643 843 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 SPEM2Q0P670 501 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 SLC36A4Q6YBV0 504 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 IPMKQ8NFU5 416 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 OR2T34Q8NGX1 318 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 ZNF592Q92610 1267 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 ZC3H10Q96K80 434 aaKnown RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.5
APTX-213ENST00000465003 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.5
APTX-213ENST00000465003 OTOGLQ3ZCN5 2332 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 LRRC72A6NJI9 287 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 METTL12A8MUP2 240 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
APTX-213ENST00000465003 AREL1O15033 823 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PGLSO95336 258 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
APTX-213ENST00000465003 LHCGRP22888 699 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 VPS41P49754 854 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
APTX-213ENST00000465003 ARMC12Q5T9G4 340 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 KIAA0895LQ68EN5 471 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 CYP2U1Q7Z449 544 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 SLC25A41Q8N5S1 370 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PIH1D2Q8WWB5 315 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PBKQ96KB5 322 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 SLC6A18Q96N87 628 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 SPATA13Q96N96 652 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 MLPHQ9BV36 600 aaPredicted RBP11.95□□□□□ -0.5
APTX-213ENST00000465003 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 GBA3Q9H227 469 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PCDH9Q9HC56 1237 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 PI4KAP42356 2102 aa11.95□□□□□ -0.5
APTX-213ENST00000465003 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 CASQ1P31415 396 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MMP12P39900 470 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MPLP40238 635 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MAPK8P45983 427 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 EPHB1P54762 984 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 CLDN2P57739 230 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MRPS25P82663 173 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 RALGDSQ12967 914 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 PAPD7Q5XG87 772 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 BRAT1Q6PJG6 821 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 RFLNAQ6ZTI6 216 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 RXFP3Q9NSD7 469 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 DKK3Q9UBP4 350 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 SAR1BQ9Y6B6 198 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 KNL1Q8NG31 2342 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 TSPAN11A1L157 253 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 RAD51BO15315 384 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MTSS1O43312 755 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 FZD6O60353 706 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 SOCS5O75159 536 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 AGTP01019 485 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 WNT3AP56704 352 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MTM1Q13496 603 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 GRM3Q14832 879 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 SF3A2Q15428 464 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 ZNF284Q2VY69 593 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 ARHGEF18Q6ZSZ5 1173 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MICALCLQ6ZW33 695 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 OR2I1PQ8NGU4 316 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 MRGPRX2Q96LB1 330 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
APTX-213ENST00000465003 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms