RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 RANBP9Q96S59 729 aa18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 VPS45Q9NRW7 570 aa18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 NCKIPSDQ9NZQ3 722 aa18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 CRYL1Q9Y2S2 319 aa18.81■□□□□ 0.6
TSPAN4-210ENST00000464987 A8MT66 165 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SYN3O14994 580 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 LDB2O43679 373 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 RAMP2O60895 175 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 PIRTP0C851 137 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 ATP5F1P24539 256 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 OR1E1P30953 314 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 MAGEA11P43364 429 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 KCNC1P48547 511 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 KCNQ1P51787 676 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 ASPHQ12797 758 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 CDC16Q13042 620 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 LPCAT4Q643R3 524 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 TMEM154Q6P9G4 183 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 AAGABQ6PD74 315 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 KIAA0408Q6ZU52 694 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 TMEM173Q86WV6 379 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 ARHGAP18Q8N392 663 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SPDL1Q96EA4 605 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 TBATAQ96M53 351 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SEMA3CQ99985 751 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 MARCH5Q9NX47 278 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 VTI1BQ9UEU0 232 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 COPG1Q9Y678 874 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 ARL5AQ9Y689 179 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 ANKRD12Q6UB98 2062 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SDHDO14521 159 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 NPHS1O60500 1241 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 LINGO3P0C6S8 592 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 THRAP10827 490 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 DPP6P42658 865 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SULT2A1Q06520 285 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 SERINC3Q13530 473 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 DHDDSQ86SQ9 333 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 DSELQ8IZU8 1212 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 CPSF7Q8N684 471 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 PDCD6IPQ8WUM4 868 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 TADA1Q96BN2 335 aa18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 CORO1CQ9ULV4 474 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-210ENST00000464987 A0A0D9SEW6 157 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 CCDC189A1A4V9 331 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 DRGXA6NNA5 263 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 S1PR4O95977 384 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 IGLV3-27P01718 113 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 LTA4HP09960 611 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 PFKPQ01813 784 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 DUSP4Q13115 394 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 CYLC2Q14093 348 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 GALNT3Q14435 633 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 LBRQ14739 615 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 FAM83EQ2M2I3 478 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 RTP2Q5QGT7 225 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 GPR158Q5T848 1215 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 CAPRIN2Q6IMN6 1127 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 IRGCQ6NXR0 463 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 OR52K2Q8NGK3 314 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 CALML6Q8TD86 181 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 UBXN10Q96LJ8 280 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 ECSITQ9BQ95 431 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 ANKRD36A6QL64 1941 aa18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 LAMA2P24043 3122 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-210ENST00000464987 LOC285095A0A1B0GVY8 99 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 TSPAN8P19075 237 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 CLCN5P51795 746 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 HK2P52789 917 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 PRAMEP78395 509 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 MRPS35P82673 323 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 DSG1Q02413 1049 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 TAS1R1Q7RTX1 841 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 RNF148Q8N7C7 305 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 RP9Q8TA86 221 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 BLOC1S5Q8TDH9 187 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 FATE1Q969F0 183 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 ZBTB26Q9HCK0 441 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 DLGAP2Q9P1A6 1054 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 VWA7Q9Y334 891 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 SLCO1B7G3V0H7 640 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 H3BNX3 289 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 STX16-NPEPL1H3BU86 382 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 IPO13O94829 963 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 PAPSS2O95340 614 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 SLC4A1P02730 911 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 PRSS56P0CW18 603 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 DNAJB13P59910 316 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 C1QTNF8P60827 252 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 IL10RBQ08334 325 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 SEMA3AQ14563 771 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 GPNMBQ14956 572 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 AGAP9Q5VTM2 703 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 PIWIL4Q7Z3Z4 852 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 OR13C4Q8NGS5 318 aa18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 USP13Q92995 863 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-210ENST00000464987 MAELQ96JY0 434 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms