RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 C16orf87Q6PH81 154 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TMEM26Q6ZUK4 368 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 USP51Q70EK9 711 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 RIOX2Q8IUF8 465 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CEP97Q8IW35 865 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 MFSD6LQ8IWD5 586 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TP53INP2Q8IXH6 220 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ADGRG5Q8IZF4 528 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 LINC01465Q8N7H1 131 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 OR13F1Q8NGS4 319 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 OR6B3Q8NGW1 331 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 PTCD2Q8WV60 388 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 HEXDCQ8WVB3 486 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TANKQ92844 425 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 WNT8BQ93098 351 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ABHD8Q96I13 439 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CPB2Q96IY4 423 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 MYRFLQ96LU7 910 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SLC2A13Q96QE2 648 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 NEURL2Q9BR09 285 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 C1orf50Q9BV19 199 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SEZ6LQ9BYH1 1024 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 DPEP3Q9H4B8 488 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TBC1D13Q9NVG8 400 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 GID8Q9NWU2 228 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SELENONQ9NZV5 590 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ACTR3BQ9P1U1 418 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 NDUFAF1Q9Y375 327 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TCAF1Q9Y4C2 921 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FADS3Q9Y5Q0 445 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 A0A087WZ62 844 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CCDC162PA2VCL2 907 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TMX2-CTNND1H3BSU7 103 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 K7EPI3 171 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 NME4O00746 187 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 IPO13O94829 963 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 ARIH2O95376 493 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP48-206ENST00000464577 HDCP19113 662 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CD247P20963 164 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CDH3P22223 829 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 GPX3P22352 226 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 RPL10P27635 214 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 HALP42357 657 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CD151P48509 253 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 RPS3AP61247 264 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 ZNF33AQ06730 810 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 NFATC3Q12968 1075 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TUBA3CQ13748 450 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 RGS21Q2M5E4 152 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 DCAF4L1Q3SXM0 396 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 COQ5Q5HYK3 327 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FGD3Q5JSP0 725 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ZNF484Q5JVG2 852 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ZNF773Q6PK81 442 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 KCTD8Q6ZWB6 473 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 LARP4Q71RC2 724 aaKnown RBP eCLIP7.34□□□□□ -1.232e-9■■■■□ 26.6
USP48-206ENST00000464577 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SLC22A9Q8IVM8 553 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 DHRSXQ8N5I4 330 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 LEMD2Q8NC56 503 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 C2CD4AQ8NCU7 369 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 TRPV3Q8NET8 790 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 DPF3Q92784 378 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ACDQ96AP0 544 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TEKT5Q96M29 485 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TSGA13Q96PP4 275 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CYP2S1Q96SQ9 504 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 MPHOSPH6Q99547 160 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 OLFM1Q99784 485 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 OMDQ99983 421 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FDXACB1Q9BRP7 624 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TMPRSS4Q9NRS4 437 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SMPD3Q9NY59 655 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 PKD2L2Q9NZM6 624 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ZNF232Q9UNY5 417 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ERGIC3Q9Y282 383 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TMED5Q9Y3A6 229 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TRIP11Q15643 1979 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TSC2P49815 1807 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 RNF103-CHMP3A0A140T963 221 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TRIM43BA6NCK2 446 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 A8MT66 165 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 H0YAE9 185 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 GOLGA8TH3BQL2 631 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 M0QYT0 321 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TSPAN1O60635 241 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ADAM23O75077 832 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 RBP1P09455 135 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 GFAPP14136 432 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 TPH1P17752 444 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 CCNA2P20248 432 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ADRA1BP35368 520 aa7.33□□□□□ -1.24
USP48-206ENST00000464577 ARCN1P48444 511 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms