RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, human

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-208	ENST00000464001	TBC1D22B	Q9NU19	505 aa		4.28	□□□□□ -1.72
ITGB1-208	ENST00000464001	GGA3	Q9NZ52	723 aa		4.28	□□□□□ -1.72
ITGB1-208	ENST00000464001	NLK	Q9UBE8	527 aa		4.28	□□□□□ -1.72
ITGB1-208	ENST00000464001	CLDN16	Q9Y5I7	305 aa		4.28	□□□□□ -1.72
ITGB1-208	ENST00000464001	CSTB	P04080	98 aa	Known RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	CSF1	P09603	554 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	DDR1	Q08345	913 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	FOXO1	Q12778	655 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	PRKG2	Q13237	762 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	RPE65	Q16518	533 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	CALCRL	Q16602	461 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	CCDC92	Q53HC0	331 aa	Predicted RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	FBXL22	Q6P050	247 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	ANKRD18A	Q8IVF6	992 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	LMNTD1	Q8N9Z9	388 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	SETD9	Q8NE22	299 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	RFWD2	Q8NHY2	731 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	HDAC2	Q92769	488 aa	Known RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	SECISBP2L	Q93073	1101 aa	Known RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	RNF183	Q96D59	192 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	WBP1	Q96G27	269 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	ZNF385A	Q96PM9	386 aa	Known RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	OR1F2P	Q96R84	312 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	HERC2P3	Q9BVR0	1158 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	AP1M1	Q9BXS5	423 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	ANKEF1	Q9NU02	776 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	CWC25	Q9NXE8	425 aa	Predicted RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	ISY1	Q9ULR0	285 aa	Known RBP	4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001	KIF26B	Q2KJY2	2108 aa		4.27	□□□□□ -1.73
ITGB1-208	ENST00000464001		B9A039	149 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	PRAC2	D3DTV9	90 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	TULP2	O00295	520 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	EIF3F	O00303	357 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	NTN3	O00634	580 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	TIMM23	O14925	209 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	TIPRL	O75663	272 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	BAIAP3	O94812	1187 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SERPINC1	P01008	464 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CGA	P01215	116 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	IGHV4-30-4	P0DP06	118 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	AMD1	P17707	334 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CTPS1	P17812	591 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CST5	P28325	142 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	KRT20	P35900	424 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	BLMH	Q13867	455 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CAPS	Q13938	189 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	DHX34	Q14147	1143 aa	Known RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	ME3	Q16798	604 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	GJB7	Q6PEY0	223 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	UNQ6126/PRO20091	Q6UXV3	157 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	MEX3B	Q6ZN04	569 aa	Known RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	DCUN1D3	Q8IWE4	304 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	DENND6A	Q8IWF6	608 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	GHDC	Q8N2G8	530 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CHCHD4	Q8N4Q1	142 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	AADAT	Q8N5Z0	425 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	NKAIN3	Q8N8D7	197 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	LSMEM1	Q8N8F7	131 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SPATA20	Q8TB22	786 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	HVCN1	Q96D96	273 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	LTV1	Q96GA3	475 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SCMH1	Q96GD3	660 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	LRFN5	Q96NI6	719 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	NPL	Q9BXD5	320 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SPRY4	Q9C004	299 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	PLEKHA5	Q9HAU0	1116 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SDF2L1	Q9HCN8	221 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	OR6C3	Q9NZP0	311 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	CNPY2	Q9Y2B0	182 aa		4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.26	□□□□□ -1.73
ITGB1-208	ENST00000464001	SYNDIG1L	A6NDD5	238 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	PRR23A	A6NEV1	266 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	LMX1B	O60663	402 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE7	O76087	117 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	MTA2	O94776	668 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	POLB	P06746	335 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE12F	P0CL80	117 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE12G	P0CL81	117 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE12I	P0CL82	117 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	ATP1A3	P13637	1013 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	KRT10	P13645	584 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	CNTF	P26441	200 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	OAS2	P29728	719 aa	Known RBP	4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	PTPN9	P43378	593 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	CENPA	P49450	140 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	TUB	P50607	506 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	ECT2L	Q008S8	904 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE1	Q13065	139 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	GAGE4	Q13068	117 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	TAF5	Q15542	800 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	MRGPRG-AS1	Q2M3A8	158 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	SPATA1	Q5VX52	437 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	ITPRIPL1	Q6GPH6	555 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	C4orf50	Q6ZRC1	276 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	C9orf139	Q6ZV77	190 aa		4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	FASTKD5	Q7L8L6	764 aa	Known RBP	4.25	□□□□□ -1.73
ITGB1-208	ENST00000464001	SNX32	Q86XE0	403 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms