RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 DSC2Q02487 901 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 AP1B1Q10567 949 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 WASHC5Q12768 1159 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 RALGDSQ12967 914 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 HLA-BQ31612 363 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 CBARPQ8N350 705 aaPredicted RBP17.82■□□□□ 0.44
VPS52-214ENST00000463486 MFSD2AQ8NA29 543 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 TADA1Q96BN2 335 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 BMFQ96LC9 184 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 ZNF830Q96NB3 372 aaPredicted RBP17.82■□□□□ 0.44
VPS52-214ENST00000463486 LENG8Q96PV6 779 aaPredicted RBP17.82■□□□□ 0.44
VPS52-214ENST00000463486 FZD3Q9NPG1 666 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 PPIL1Q9Y3C6 166 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 H0Y8X5 98 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 APOC4-APOC2K7ER74 178 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 PPP1R12AO14974 1030 aaPredicted RBP17.81■□□□□ 0.44
VPS52-214ENST00000463486 PGLSO95336 258 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 APOC2P02655 101 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 PDHA1P08559 390 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 GM2AP17900 193 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 HNRNPA2B1P22626 353 aaKnown RBP17.81■□□□□ 0.44
VPS52-214ENST00000463486 CES1P23141 567 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 SEMG2Q02383 582 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 PTPRRQ15256 657 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 GCNT7Q6ZNI0 430 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 ABI3BPQ7Z7G0 1075 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 IQCHQ86VS3 1027 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 ZSCAN30Q86W11 494 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 SPATS2Q86XZ4 545 aaKnown RBP17.81■□□□□ 0.44
VPS52-214ENST00000463486 PIH1D2Q8WWB5 315 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 P3H4Q92791 437 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 CENPTQ96BT3 561 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 GTPBP2Q9BX10 602 aaKnown RBP17.81■□□□□ 0.44
VPS52-214ENST00000463486 CEP41Q9BYV8 373 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 LZTFL1Q9NQ48 299 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 AASDHPPTQ9NRN7 309 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 GPR27Q9NS67 375 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 CDV3Q9UKY7 258 aaKnown RBP17.81■□□□□ 0.44
VPS52-214ENST00000463486 PPP2R2CQ9Y2T4 447 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 RAI2Q9Y5P3 530 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 HS3ST3A1Q9Y663 406 aa17.81■□□□□ 0.44
VPS52-214ENST00000463486 TLR4O00206 839 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 KCNK3O14649 394 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 CD59P13987 128 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 SDHBP21912 280 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 PTPN3P26045 913 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 ID4P47928 161 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 CLDN2P57739 230 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 NXPH1P58417 271 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 POLR2LP62875 67 aaKnown RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 SKOR1P84550 965 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 ELP6Q0PNE2 266 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 KLF1Q13351 362 aaPredicted RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 ZNF211Q13398 564 aaPredicted RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 NOMO1Q15155 1222 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 TEAD4Q15561 434 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 ZNF423Q2M1K9 1284 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 TEX44Q53QW1 395 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 DPPA4Q7L190 304 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 BZW1Q7L1Q6 419 aaKnown RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 HAUS1Q96CS2 278 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 TEKT5Q96M29 485 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 MCCC1Q96RQ3 725 aaPredicted RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 RTKNQ9BST9 563 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 WRAP53Q9BUR4 548 aaKnown RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 FNDC3AQ9Y2H6 1198 aaKnown RBP17.8■□□□□ 0.44
VPS52-214ENST00000463486 PCDHB9Q9Y5E1 797 aa17.8■□□□□ 0.44
VPS52-214ENST00000463486 LRRK1Q38SD2 2015 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 CFAP69A5D8W1 941 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 POM121BA6NF01 834 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 NEMP1O14524 444 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
VPS52-214ENST00000463486 LIG3P49916 1009 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 ITKQ08881 620 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 XRCC4Q13426 336 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 PUM1Q14671 1186 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS52-214ENST00000463486 AGERQ15109 404 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 SHBQ15464 509 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 MEI1Q5TIA1 1274 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 KDM7AQ6ZMT4 941 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 DBX2Q6ZNG2 339 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 PIP4P1Q86T03 277 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 ZC3H18Q86VM9 953 aaKnown RBP17.79■□□□□ 0.44
VPS52-214ENST00000463486 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS52-214ENST00000463486 ACTL9Q8TC94 416 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 TFB1MQ8WVM0 346 aaKnown RBP17.79■□□□□ 0.44
VPS52-214ENST00000463486 UBE2Q2Q8WVN8 375 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 IMP4Q96G21 291 aaKnown RBP17.79■□□□□ 0.44
VPS52-214ENST00000463486 QKIQ96PU8 341 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS52-214ENST00000463486 SMIM14Q96QK8 99 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 MYOCQ99972 504 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 TDRD1Q9BXT4 1180 aaKnown RBP17.79■□□□□ 0.44
VPS52-214ENST00000463486 GAREM1Q9H706 876 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 C10orf88Q9H8K7 445 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 NCOR2Q9Y618 2525 aa17.79■□□□□ 0.44
VPS52-214ENST00000463486 A0A1W2PQ67 120 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 TCRBV7S2A1N4TA0A589 114 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 DCDC2BA2VCK2 349 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 ZNF883P0CG24 379 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms