RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 APOOQ9BUR5 198 aa20.93■□□□□ 0.94
CPSF7-209ENST00000463244 STK33Q9BYT3 514 aa20.93■□□□□ 0.94
CPSF7-209ENST00000463244 FAM117AQ9C073 453 aa20.93■□□□□ 0.94
CPSF7-209ENST00000463244 KLC2Q9H0B6 622 aa20.93■□□□□ 0.94
CPSF7-209ENST00000463244 KLQ9UEF7 1012 aa20.93■□□□□ 0.94
CPSF7-209ENST00000463244 NOCTQ9UK39 431 aaKnown RBP20.93■□□□□ 0.94
CPSF7-209ENST00000463244 NVLO15381 856 aaKnown RBP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 CYP1A1P04798 512 aaPredicted RBP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 JMJD7P0C870 316 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 LIPCP11150 499 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 XPAP23025 273 aaPredicted RBP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 CSRP3P50461 194 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 INPP5AQ14642 412 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 AGERQ15109 404 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 RTL3Q8N8U3 475 aaKnown RBP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 FAM172AQ8WUF8 416 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 SLC20A1Q8WUM9 679 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 RBM15Q96T37 977 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 PISDQ9UG56 409 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 LOXL2Q9Y4K0 774 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 OR1A2Q9Y585 309 aa20.92■□□□□ 0.94
CPSF7-209ENST00000463244 HEMK1Q9Y5R4 338 aaPredicted RBP20.92■□□□□ 0.94
CPSF7-209ENST00000463244 TSPAN11A1L157 253 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 PIGNO95427 931 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 UGP2Q16851 508 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 HSP90AA4PQ58FG1 418 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 KCTD16Q68DU8 428 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 CCNJLQ8IV13 435 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 ATL2Q8NHH9 583 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 EXTL1Q92935 676 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 HMCESQ96FZ2 354 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 PDXPQ96GD0 296 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 EXOC2Q96KP1 924 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 WDR92Q96MX6 357 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 C11orf70Q9BRQ4 267 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 PCDH12Q9NPG4 1184 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 STARD5Q9NSY2 213 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 LHX3Q9UBR4 397 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 APPL1Q9UKG1 709 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 DGKBQ9Y6T7 804 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 RELNP78509 3460 aa20.91■□□□□ 0.94
CPSF7-209ENST00000463244 RASA4BC9J798 803 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 PES1O00541 588 aaKnown RBP20.9■□□□□ 0.94
CPSF7-209ENST00000463244 RASA4O43374 803 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 CHRNB2P17787 502 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 YBEYP58557 167 aaPredicted RBP20.9■□□□□ 0.94
CPSF7-209ENST00000463244 FMO1Q01740 532 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 CDR2Q01850 454 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 ZFP36L1Q07352 338 aaKnown RBP20.9■□□□□ 0.94
CPSF7-209ENST00000463244 SERINC3Q13530 473 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 CERCAMQ5T4B2 595 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 PYROXD2Q8N2H3 581 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 SLC30A5Q8TAD4 765 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 NCAPGQ9BPX3 1015 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 SUV39H2Q9H5I1 410 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 IL17BQ9UHF5 180 aa20.9■□□□□ 0.94
CPSF7-209ENST00000463244 TNFP01375 233 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 PCCBP05166 539 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 GLB1P16278 677 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 ITGB6P18564 788 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 ITIH1P19827 911 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 EPHB2P29323 1055 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 MMP12P39900 470 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 LIG3P49916 1009 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 MTM1Q13496 603 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 GRM3Q14832 879 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 CYTH1Q15438 398 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 PARP15Q460N3 678 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 OGFOD3Q6PK18 319 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 SLFN11Q7Z7L1 901 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 DNAAF5Q86Y56 855 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 Q8N9G6 341 aaPredicted RBP20.89■□□□□ 0.93
CPSF7-209ENST00000463244 TMEM159Q96B96 161 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 ARHGAP9Q9BRR9 750 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 TRIM4Q9C037 500 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 SEPT10Q9P0V9 454 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 DAAM1Q9Y4D1 1078 aa20.89■□□□□ 0.93
CPSF7-209ENST00000463244 LRRK2Q5S007 2527 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 PRAMEF33A0A0G2JMD5 474 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 TERTO14746 1132 aaKnown RBP20.88■□□□□ 0.93
CPSF7-209ENST00000463244 PRAMEF10O60809 474 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 GFPT2O94808 682 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 KRT3P12035 628 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 PNLIPP16233 465 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 RFC1P35251 1148 aaPredicted RBP20.88■□□□□ 0.93
CPSF7-209ENST00000463244 GSCP56915 257 aaPredicted RBP20.88■□□□□ 0.93
CPSF7-209ENST00000463244 PTP4A2Q12974 167 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 MANEAQ5SRI9 462 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 ERAP2Q6P179 960 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 BRAT1Q6PJG6 821 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 SPRED1Q7Z699 444 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 PLA2G15Q8NCC3 412 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 DOPEY2Q9Y3R5 2298 aa20.88■□□□□ 0.93
CPSF7-209ENST00000463244 WASH4PA8MWX3 477 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 GPD1P21695 349 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 ETV5P41161 510 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 UBE2HP62256 183 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 DPCR1Q3MIW9 517 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 EFHC2Q5JST6 749 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 WDR59Q6PJI9 974 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms