RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 ASCC3Q8N3C0 2202 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 DCDC2BA2VCK2 349 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 KCNK5O95279 499 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 RABIFP47224 123 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 ARRB1P49407 418 aaPredicted RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 CCNYQ8ND76 341 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 IL12RB2Q99665 862 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 NT5MQ9NPB1 228 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 DNPEPQ9ULA0 475 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 WDR87Q6ZQQ6 2873 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 FRYLO94915 3013 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 DMDP11532 3685 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 hCG_1818297A0A087WSY0 165 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 FPGTO14772 594 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 WNT9AO14904 365 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 CPP00450 1065 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 TNNT1P13805 278 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 PRLRP16471 622 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 FGL2Q14314 439 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 ZNF662Q6ZS27 426 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 NAXDQ8IW45 347 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 RPL26L1Q9UNX3 145 aaKnown RBP13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 PPIL1Q9Y3C6 166 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 TMEM131Q92545 1883 aa13.16□□□□□ -0.3
R3HDM1-213ENST00000463230 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 H0Y8X5 98 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 PGLSO95336 258 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 RWDD2BP57060 319 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 ARMC12Q5T9G4 340 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 BBS12Q6ZW61 710 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 PAF1Q8N7H5 531 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 SEMA3CQ99985 751 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 GGT7Q9UJ14 662 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 AMFRQ9UKV5 643 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 DUSP10Q9Y6W6 482 aa13.15□□□□□ -0.3
R3HDM1-213ENST00000463230 HACD1B0YJ81 288 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 CST8O60676 142 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 THEGLP0DJG4 465 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 CYP2A6P11509 494 aaPredicted RBP13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 NOVA1P51513 510 aaKnown RBP13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 YPEL5P62699 121 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 XRCC4Q13426 336 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 NT5DC3Q86UY8 548 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 ZSWIM9Q86XI8 627 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 RAVER1Q8IY67 606 aaKnown RBP13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 UBL4BQ8N7F7 174 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 OR2I1PQ8NGU4 316 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 KLK6Q92876 244 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 CENPTQ96BT3 561 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 CDC6Q99741 560 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 IL21RQ9HBE5 538 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.31
R3HDM1-213ENST00000463230 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 PSMD11O00231 422 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 KRT86O43790 486 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 MMP20O60882 483 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 PAK4O96013 591 aaPredicted RBP13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 GRK6P43250 576 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 TRAF2Q12933 501 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 PTK2BQ14289 1009 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 LAYNQ6UX15 382 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 GLRX5Q86SX6 157 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 SPATS2Q86XZ4 545 aaKnown RBP13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 KRT35Q92764 455 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 P3H4Q92791 437 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 VAT1Q99536 393 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 GRPEL1Q9HAV7 217 aa13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 COL5A1P20908 1838 aaPredicted RBP13.14□□□□□ -0.31
R3HDM1-213ENST00000463230 FZD6O60353 706 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 HLA-DQB2P05538 268 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 C6P13671 934 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 VIPR1P32241 457 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 MARCKSL1P49006 195 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 LIG3P49916 1009 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PEX5P50542 639 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 PFN3P60673 137 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 MAXP61244 160 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 ITKQ08881 620 aa13.13□□□□□ -0.31
R3HDM1-213ENST00000463230 RALGDSQ12967 914 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms