RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CDKN3Q16667 212 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 ARL13BQ3SXY8 428 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 EFHC2Q5JST6 749 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 PERM1Q5SV97 790 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 SCYL2Q6P3W7 929 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 CRTC1Q6UUV9 634 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF783Q6ZMS7 281 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 EFL1Q7Z2Z2 1120 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 SLFN11Q7Z7L1 901 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 DCP2Q8IU60 420 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 RBFAQ8N0V3 343 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 LSMEM2Q8N112 164 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 PCDH20Q8N6Y1 951 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 OR8K1Q8NGG5 319 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 MAPK15Q8TD08 544 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 PPP1R16AQ96I34 528 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 DUSP23Q9BVJ7 150 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 BOCQ9BWV1 1114 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 C1QTNF2Q9BXJ5 285 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 CEP44Q9C0F1 390 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 DYRK4Q9NR20 520 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 MYO1AQ9UBC5 1043 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 AP4E1Q9UPM8 1137 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 FCF1Q9Y324 198 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 CSNK1G3Q9Y6M4 447 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 TEX15Q9BXT5 2789 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 USP9XQ93008 2570 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPTAN1Q13813 2472 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ANKRD62A6NC57 917 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 NEMP2A6NFY4 417 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 IGLON5A6NGN9 336 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 WASH4PA8MWX3 477 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 J3QKU1 62 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 KLK10O43240 276 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 GCATO75600 419 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 JUNDP17535 347 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 GKP32189 559 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCK1P35558 622 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 IGFALSP35858 605 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 MAPKAPK2P49137 400 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 DUSP3P51452 185 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNF75DP51815 510 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC25A11Q02978 314 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 GNA12Q03113 381 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC15Q0P6D6 951 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 PDE1CQ14123 709 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 DEFB133Q30KQ1 61 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 TAF1BQ53T94 588 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 CARD16Q5EG05 197 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC122Q5T0U0 273 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 BROXQ5VW32 411 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 TXNRD3NBQ6F5E7 133 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 RWDD4Q6NW29 188 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 CLEC14AQ86T13 490 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 VPS36Q86VN1 386 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC35F3Q8IY50 421 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 NIPA2Q8N8Q9 360 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 RTL3Q8N8U3 475 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 TC2NQ8N9U0 490 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 DENND6BQ8NEG7 585 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 OR6K2Q8NGY2 324 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARHGEF2Q92974 986 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC46A1Q96NT5 459 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 LENG8Q96PV6 779 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 HEPHQ9BQS7 1158 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 LRRC61Q9BV99 259 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 NUP85Q9BW27 656 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 DPH1Q9BZG8 443 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 TM6SF2Q9BZW4 377 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 TRIM5Q9C035 493 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 KLC2Q9H0B6 622 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 RETREG1Q9H6L5 497 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZDHHC6Q9H6R6 413 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ATP13A1Q9HD20 1204 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 MRPL47Q9HD33 250 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 THSD1Q9NS62 852 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCSK1NQ9UHG2 260 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 DNAI1Q9UI46 699 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 ANAPC7Q9UJX3 599 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCDHGA8Q9Y5G5 932 aa8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-210ENST00000462553 CXorf51AA0A1B0GTR3 108 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CPED1A4D0V7 1026 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 C16orf96A6NNT2 1141 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 AKR1B15C9JRZ8 316 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 H3BM21 787 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 PYCARD-AS1I3L0S3 204 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 K7ENP7 123 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 FPGTO14772 594 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 TPP1O14773 563 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 AREL1O15033 823 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 TCEA3O75764 348 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 CELA2BP08218 269 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 FECHP22830 423 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 EPHB2P29323 1055 aa8.01□□□□□ -1.13
CDC42BPA-210ENST00000462553 HTR7P34969 479 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms