RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
SKA3-204ENST00000462482 APOOQ9BUR5 198 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 KLC2Q9H0B6 622 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 PCDH12Q9NPG4 1184 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 ANO10Q9NW15 660 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 LHX3Q9UBR4 397 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 ATP8A1Q9Y2Q0 1164 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 COQ6Q9Y2Z9 468 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 TP53BP1Q12888 1972 aaPredicted RBP15.52■□□□□ 0.07
SKA3-204ENST00000462482 CACNB4O00305 520 aaPredicted RBP15.51■□□□□ 0.07
SKA3-204ENST00000462482 INSIG1O15503 277 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 PALMO75781 387 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 PCCBP05166 539 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 KELP23276 732 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 POLR2LP62875 67 aaKnown RBP15.51■□□□□ 0.07
SKA3-204ENST00000462482 MTM1Q13496 603 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 ALG11Q2TAA5 492 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 ACAD10Q6JQN1 1059 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 CCDC81Q6ZN84 652 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 ZNF843Q8N446 348 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 CINPQ9BW66 212 aaPredicted RBP15.51■□□□□ 0.07
SKA3-204ENST00000462482 SP110Q9HB58 689 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 EPB41L5Q9HCM4 733 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 LIMA1Q9UHB6 759 aaKnown RBP15.51■□□□□ 0.07
SKA3-204ENST00000462482 AP4E1Q9UPM8 1137 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 CELSR3Q9NYQ7 3312 aa15.51■□□□□ 0.07
SKA3-204ENST00000462482 ASXL3Q9C0F0 2248 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 TSPAN11A1L157 253 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 CFAP69A5D8W1 941 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 EEF2KO00418 725 aaKnown RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 PLD2O14939 933 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 RNF8O76064 485 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 ITGA2BP08514 1039 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 TNFAIP3P21580 790 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 PSMA2P25787 234 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 RPL7AP62424 266 aaKnown RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 BCL2L1Q07817 233 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 TCEA2Q15560 299 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 SRLQ86TD4 932 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 JAMLQ86YT9 394 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 CAMK1DQ8IU85 385 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 MCOLN2Q8IZK6 566 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 FBXO39Q8N4B4 442 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 KYQ8NBH2 561 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 CCDC74AQ96AQ1 378 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 VOPP1Q96AW1 172 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 LIN37Q96GY3 246 aaPredicted RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 CELF6Q96J87 481 aaKnown RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 TMEM74Q96NL1 305 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 DHX35Q9H5Z1 703 aaKnown RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 PARVAQ9NVD7 372 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 PNMA8BQ9ULN7 279 aaPredicted RBP15.5■□□□□ 0.07
SKA3-204ENST00000462482 OR1A2Q9Y585 309 aa15.5■□□□□ 0.07
SKA3-204ENST00000462482 CDRT15L2A8MXV6 281 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 J3KR12 359 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 PDE2AO00408 941 aaPredicted RBP15.49■□□□□ 0.07
SKA3-204ENST00000462482 NTN3O00634 580 aaPredicted RBP15.49■□□□□ 0.07
SKA3-204ENST00000462482 RPLP0P05388 317 aaKnown RBP15.49■□□□□ 0.07
SKA3-204ENST00000462482 CELA2BP08218 269 aaPredicted RBP15.49■□□□□ 0.07
SKA3-204ENST00000462482 ELFN1P0C7U0 828 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 NFKBIAP25963 317 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 MMP12P39900 470 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 CSNK1DP48730 415 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 PAPOLAP51003 745 aaKnown RBP15.49■□□□□ 0.07
SKA3-204ENST00000462482 INHBCP55103 352 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 AGERQ15109 404 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 STX1AQ16623 288 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 ZSCAN23Q3MJ62 389 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 RAB11FIP2Q7L804 512 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 TAF8Q7Z7C8 310 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 CLEC14AQ86T13 490 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 LRRC19Q9H756 370 aa15.49■□□□□ 0.07
SKA3-204ENST00000462482 TCRBV5S1A1TA0A578 114 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 D6RAR5 112 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 GOLGA6L22H0YM25 854 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 DFFAO00273 331 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 PRPSAP2O60256 369 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 JMJD7P0C870 316 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 PLA2G2AP14555 144 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 RENBPP51606 427 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 CCL7P80098 99 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 RFTN1Q14699 578 aaPredicted RBP15.48■□□□□ 0.07
SKA3-204ENST00000462482 PPP1R15BQ5SWA1 713 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 ERMARDQ5T6L9 678 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 FAM46DQ8NEK8 389 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 OR56A4Q8NGH8 313 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 PRR11Q96HE9 360 aaPredicted RBP15.48■□□□□ 0.07
SKA3-204ENST00000462482 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
SKA3-204ENST00000462482 RBM15Q96T37 977 aaKnown RBP eCLIP15.48■□□□□ 0.07
SKA3-204ENST00000462482 SLC39A8Q9C0K1 460 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 GPATCH2LQ9NWQ4 482 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 MOSPD1Q9UJG1 213 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 DGKBQ9Y6T7 804 aa15.48■□□□□ 0.07
SKA3-204ENST00000462482 ARID1BQ8NFD5 2236 aaPredicted RBP15.48■□□□□ 0.07
SKA3-204ENST00000462482 A0A1W2PNU3 283 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 J3QKU1 62 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms