RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MACC1Q6ZN28 852 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 PHACTR4Q8IZ21 702 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 RBFAQ8N0V3 343 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 BTBD6Q96KE9 485 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 ZNF599Q96NL3 588 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 CSPG4P5Q96PW8 444 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 NUP85Q9BW27 656 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 NRSN2Q9GZP1 204 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 TCEAL2Q9H3H9 227 aaPredicted RBP19.09■□□□□ 0.65
VARS-220ENST00000461874 EVA1BQ9NVM1 165 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 SPASTQ9UBP0 616 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 ANAPC7Q9UJX3 599 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 LHX6Q9UPM6 363 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 OPA1O60313 960 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 MT-CO3P00414 261 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 PRKCGP05129 697 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 GP1BAP07359 652 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 PEX5P50542 639 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 SCNN1BP51168 640 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 RENBPP51606 427 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 SEMG2Q02383 582 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 SLC25A11Q02978 314 aaKnown RBP19.08■□□□□ 0.64
VARS-220ENST00000461874 BCL2L1Q07817 233 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 SLC10A7Q0GE19 358 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 LBRQ14739 615 aaKnown RBP19.08■□□□□ 0.64
VARS-220ENST00000461874 RTP5Q14D33 572 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 AGERQ15109 404 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 DEFB133Q30KQ1 61 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 C19orf48Q6RUI8 117 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 TBATAQ96M53 351 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 NSMCE3Q96MG7 304 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 PCDH18Q9HCL0 1135 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 APOBEC3BQ9UH17 382 aaKnown RBP19.08■□□□□ 0.64
VARS-220ENST00000461874 SALL4Q9UJQ4 1053 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 CACNA1GO43497 2377 aa19.08■□□□□ 0.64
VARS-220ENST00000461874 CFAP69A5D8W1 941 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 TMEM110-MUSTN1A8MSY1 372 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 TRAFD1O14545 582 aaPredicted RBP19.07■□□□□ 0.64
VARS-220ENST00000461874 LZTS3O60299 673 aaPredicted RBP19.07■□□□□ 0.64
VARS-220ENST00000461874 GCATO75600 419 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 PEX11BO96011 259 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 CASP14P31944 242 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 AP1S1P61966 158 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 PPARDQ03181 441 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 PRRT3Q5FWE3 981 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 CCDC122Q5T0U0 273 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 FAXCQ5TGI0 409 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 CDCP2Q5VXM1 449 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 IL12RB2Q99665 862 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 SLC13A1Q9BZW2 595 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 NCKIPSDQ9NZQ3 722 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 NENFQ9UMX5 172 aa19.07■□□□□ 0.64
VARS-220ENST00000461874 LMO7DNF2Z398 122 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 MYO1FO00160 1098 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 MAFKO60675 156 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 HNRNPH3P31942 346 aaKnown RBP19.06■□□□□ 0.64
VARS-220ENST00000461874 HSPA9P38646 679 aaKnown RBP19.06■□□□□ 0.64
VARS-220ENST00000461874 ADKP55263 362 aaKnown RBP19.06■□□□□ 0.64
VARS-220ENST00000461874 POLR2LP62875 67 aaKnown RBP19.06■□□□□ 0.64
VARS-220ENST00000461874 RALGDSQ12967 914 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 C1orf61Q13536 156 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 INPP5AQ14642 412 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 IFI44Q8TCB0 444 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 APOOQ9BUR5 198 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 LRRC61Q9BV99 259 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 XPO4Q9C0E2 1151 aaKnown RBP19.06■□□□□ 0.64
VARS-220ENST00000461874 SCUBE2Q9NQ36 999 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.06■□□□□ 0.64
VARS-220ENST00000461874 AK5Q9Y6K8 562 aa19.06■□□□□ 0.64
VARS-220ENST00000461874 A0A087WV48 116 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.05■□□□□ 0.64
VARS-220ENST00000461874 TTC24A2A3L6 582 aaPredicted RBP19.05■□□□□ 0.64
VARS-220ENST00000461874 TPM3P06753 285 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 CR2P20023 1033 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 IL4RP24394 825 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 ZNF235Q14590 738 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 NFATC4Q14934 902 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 CDKN3Q16667 212 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 LIPIQ6XZB0 460 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 DPPA4Q7L190 304 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 PGBD5Q8N414 524 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 FAM71BQ8TC56 605 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 HNRNPLLQ8WVV9 542 aaKnown RBP19.05■□□□□ 0.64
VARS-220ENST00000461874 SPOCK2Q92563 424 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 BOCQ9BWV1 1114 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 CLPBQ9H078 707 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 ABCG4Q9H172 646 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 RCOR3Q9P2K3 495 aaPredicted RBP19.05■□□□□ 0.64
VARS-220ENST00000461874 OR1A2Q9Y585 309 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 ITPR1Q14643 2758 aa19.05■□□□□ 0.64
VARS-220ENST00000461874 ASXL3Q9C0F0 2248 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 CPED1A4D0V7 1026 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 EME2A4GXA9 379 aaPredicted RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 YY2O15391 372 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 HTRA2O43464 458 aaPredicted RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 RECQL5O94762 991 aaPredicted RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 PCCBP05166 539 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 ANXA6P08133 673 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 TSHRP16473 764 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 HTR1BP28222 390 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms