RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DAZAP2Q15038 168 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 MED22Q15528 200 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 TRIP6Q15654 476 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 INPP5JQ15735 1006 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 EZH2Q15910 746 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 HSPB2Q16082 182 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SMTNL2Q2TAL5 461 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 FAM133BQ5BKY9 247 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 PIK3CD-AS1Q5SR53 167 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 HEPHL1Q6MZM0 1159 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 C16orf54Q6UWD8 224 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 LINGO2Q7L985 606 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 RNF168Q8IYW5 571 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 RBFAQ8N0V3 343 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 ZCCHC9Q8N567 271 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 KDM1BQ8NB78 822 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SCCPDHQ8NBX0 429 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 PRSS3P2Q8NHM4 247 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SLC35F5Q8WV83 523 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SNAPC3Q92966 411 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 PERPQ96FX8 193 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 VCPIP1Q96JH7 1222 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 C1orf74Q96LT6 269 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 HARBI1Q96MB7 349 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 CMTM3Q96MX0 182 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM47Q9BQJ4 181 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 MMTAG2Q9BU76 263 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SCNM1Q9BWG6 230 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 HEMGNQ9BXL5 484 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 MRPL1Q9BYD6 325 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 BPIFA1Q9NP55 256 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 DECR2Q9NUI1 292 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 ABI3Q9P2A4 366 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NDRG3Q9UGV2 375 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 CHORDC1Q9UHD1 332 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NRBP1Q9UHY1 535 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 SRPRBQ9Y5M8 271 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 MAU2Q9Y6X3 613 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 A0A0G2JK05 382 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SMIM35A0A1B0GVV1 85 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 DDTLA6NHG4 134 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SEC14L5O43304 696 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LIASO43766 372 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PLOD3O60568 738 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ZC3H11AO75152 810 aaKnown RBP eCLIP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 RBMXL2O75526 392 aaKnown RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 IFNA2P01563 188 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 RB1P06400 928 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SRPRAP08240 638 aaKnown RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 MMP2P08253 660 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PRR35P0CG20 571 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TFPIP10646 304 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SRD5A1P18405 259 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 AGAP20933 346 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SAT1P21673 171 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TNFSF8P32971 234 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 UBA7P41226 1012 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PIK3CAP42336 1068 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 KCNJ4P48050 445 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PIP4K2AP48426 406 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LMAN1P49257 510 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CDH12P55289 794 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CLDN2P57739 230 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 GAD2Q05329 585 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF91Q05481 1191 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ACSM2AQ08AH3 577 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 STK4Q13043 487 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 FRG1Q14331 258 aaKnown RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 C15orf59Q2T9L4 293 aaPredicted RBP3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CEP78Q5JTW2 689 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 C10orf25Q5T742 122 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 MFSD4BQ5TF39 518 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 MORN5Q5VZ52 161 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ACSM2BQ68CK6 577 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 JADE1Q6IE81 842 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SLC18B1Q6NT16 456 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TTI2Q6NXR4 508 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TMCO3Q6UWJ1 677 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LCTLQ6UWM7 567 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 KRBA2Q6ZNG9 492 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CHST9Q7L1S5 443 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ENOSF1Q7L5Y1 443 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 GALNT5Q7Z7M9 940 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 ADGRA1Q86SQ6 560 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TRIM74Q86UV6 250 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TRIM73Q86UV7 250 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 PALB2Q86YC2 1186 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LURAP1LQ8IV03 231 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 CNGA4Q8IV77 575 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 FAM217AQ8IXS0 508 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 WDTC1Q8N5D0 677 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 HORMAD2Q8N7B1 307 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LSMEM1Q8N8F7 131 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TEX45Q8NA69 505 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 GJC3Q8NFK1 279 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 RASSF8Q8NHQ8 419 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 LPAR1Q92633 364 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM18Q96B42 140 aa3.15□□□□□ -1.91
HDAC6-212ENST00000461608 SEPT5Q99719 369 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms