RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CLEC4GQ6UXB4 293 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 SYT13Q7L8C5 426 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 PATL1Q86TB9 770 aaKnown RBP4.43□□□□□ -1.7
UBA3-204ENST00000461522 TCP11L2Q8N4U5 519 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 KCNH5Q8NCM2 988 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 NR4A3Q92570 626 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 SLC25A33Q9BSK2 321 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 ANP32EQ9BTT0 268 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 PANK3Q9H999 370 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 PLEKHA2Q9HB19 425 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 FBXO40Q9UH90 709 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 SLC45A1Q9Y2W3 748 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 KNSTRNQ9Y448 316 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 RPS6KL1Q9Y6S9 549 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 EDC4Q6P2E9 1401 aaKnown RBP4.43□□□□□ -1.7
UBA3-204ENST00000461522 PPIP5K1Q6PFW1 1433 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.43□□□□□ -1.7
UBA3-204ENST00000461522 CGNL1Q0VF96 1302 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 TTC21BQ7Z4L5 1316 aa4.43□□□□□ -1.7
UBA3-204ENST00000461522 PLSCR5A0PG75 271 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 LINC01553A4QN01 128 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 E7EVH7 732 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 WDHD1O75717 1129 aaPredicted RBP4.42□□□□□ -1.7
UBA3-204ENST00000461522 DDNO94850 711 aaPredicted RBP4.42□□□□□ -1.7
UBA3-204ENST00000461522 METTL18O95568 372 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 CSF1P09603 554 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 YWHAQP27348 245 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 CST5P28325 142 aaPredicted RBP4.42□□□□□ -1.7
UBA3-204ENST00000461522 USP6P35125 1406 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 GJC1P36383 396 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 MTNR1AP48039 350 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 MCM2P49736 904 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 GRSF1Q12849 480 aaKnown RBP eCLIP4.42□□□□□ -1.7
UBA3-204ENST00000461522 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
UBA3-204ENST00000461522 RUNDC3AQ59EK9 446 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 FAM76BQ5HYJ3 339 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 EFHC1Q5JVL4 640 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 SYCP2LQ5T4T6 812 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 OR6Y1Q8NGX8 325 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 KTI12Q96EK9 354 aaPredicted RBP4.42□□□□□ -1.7
UBA3-204ENST00000461522 DUX5Q96PT3 197 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 MSTO1Q9BUK6 570 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 LHPPQ9H008 270 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 OCIAD1Q9NX40 245 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 DHDHQ9UQ10 334 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 COMMD10Q9Y6G5 202 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 STRCP1A6NGW2 1772 aa4.42□□□□□ -1.7
UBA3-204ENST00000461522 KIF24Q5T7B8 1368 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 JCADQ9P266 1359 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 ARHGEF28Q8N1W1 1705 aaKnown RBP4.41□□□□□ -1.7
UBA3-204ENST00000461522 SEPT4O43236 478 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 STRNO43815 780 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 SERPINI2O75830 405 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 CAMTA2O94983 1202 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 DCTDP32321 178 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 MXI1P50539 228 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 ADORA2A-AS1P86434 159 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 BLMHQ13867 455 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 GFI1BQ5VTD9 330 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 GPT2Q8TD30 523 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 NPFFR1Q9GZQ6 430 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
UBA3-204ENST00000461522 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 SRP68Q9UHB9 627 aaKnown RBP4.41□□□□□ -1.7
UBA3-204ENST00000461522 CD163L1Q9NR16 1453 aa4.41□□□□□ -1.7
UBA3-204ENST00000461522 A0A1W2PP64 1363 aa4.4□□□□□ -1.7
UBA3-204ENST00000461522 CPDO75976 1380 aa4.4□□□□□ -1.7
UBA3-204ENST00000461522 AHDC1Q5TGY3 1603 aaPredicted RBP4.4□□□□□ -1.7
UBA3-204ENST00000461522 A0A096LPK6 155 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 OR6C68A6NDL8 312 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 CKMT1AP12532 417 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 C21orf33P30042 268 aaPredicted RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 HSPA1LP34931 641 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 DEKP35659 375 aaKnown RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 GPR12P47775 334 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 PRKAA2P54646 552 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 POU3F1Q03052 451 aaPredicted RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 RPE65Q16518 533 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 ZNF718Q3SXZ3 478 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 GSG1LQ6UXU4 331 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 ATOH1Q92858 354 aaPredicted RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 ZNF622Q969S3 477 aaKnown RBP eCLIP4.4□□□□□ -1.71
UBA3-204ENST00000461522 COG3Q96JB2 828 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 CLK4Q9HAZ1 481 aaKnown RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 PLCB1Q9NQ66 1216 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 NLKQ9UBE8 527 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 GRHPRQ9UBQ7 328 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 MORC2Q9Y6X9 1032 aaPredicted RBP4.4□□□□□ -1.71
UBA3-204ENST00000461522 PXDNQ92626 1479 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 INSRP06213 1382 aa4.4□□□□□ -1.71
UBA3-204ENST00000461522 TNS3Q68CZ2 1445 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms