RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PCDH12Q9NPG4 1184 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 HAUS2Q9NVX0 235 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 DNAJC28Q9NX36 388 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 DDX56Q9NY93 547 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 ZMIZ1Q9ULJ6 1067 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 ATP8A1Q9Y2Q0 1164 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 TRPM6Q9BX84 2022 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 AKAP13Q12802 2813 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 TSPAN11A1L157 253 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 TTC24A2A3L6 582 aaPredicted RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 RFPL3O75679 317 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 TM7SF2O76062 418 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 NDUFA10O95299 355 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 LCA5LO95447 670 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 PRKCGP05129 697 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 DGKAP23743 735 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 NAP1L1P55209 391 aaKnown RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 MAXP61244 160 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 GBE1Q04446 702 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 ITKQ08881 620 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 IFI16Q16666 785 aaKnown RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 UGP2Q16851 508 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 HS1BP3Q53T59 392 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 ZNF542PQ5EBM4 170 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 LRRC38Q5VT99 294 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 RFX6Q8HWS3 928 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 PQLC3Q8N755 202 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 CCNYQ8ND76 341 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 IFT43Q96FT9 208 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 NUDCD1Q96RS6 583 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 MGME1Q9BQP7 344 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 TFR2Q9UP52 801 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 PCDHGA1Q9Y5H4 931 aa15.5■□□□□ 0.07
VARS-219ENST00000461328 EPN1Q9Y6I3 576 aaPredicted RBP15.5■□□□□ 0.07
VARS-219ENST00000461328 APOL1O14791 398 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 FFAR2O15552 330 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 PIAS2O75928 621 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 KRT37O76014 449 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 PEX11BO96011 259 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 ACADVLP49748 655 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 SEMG2Q02383 582 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 PDE1CQ14123 709 aaPredicted RBP15.49■□□□□ 0.07
VARS-219ENST00000461328 FZD2Q14332 565 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 TCEAL1Q15170 157 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 PARGQ86W56 976 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 ZSWIM9Q86XI8 627 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 SLC25A45Q8N413 288 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 PGBD5Q8N414 524 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.49■□□□□ 0.07
VARS-219ENST00000461328 RNF157Q96PX1 679 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 BAG1Q99933 345 aaPredicted RBP15.49■□□□□ 0.07
VARS-219ENST00000461328 GPR27Q9NS67 375 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 UCKL1Q9NWZ5 548 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 HEY1Q9Y5J3 304 aa15.49■□□□□ 0.07
VARS-219ENST00000461328 USP24Q9UPU5 2620 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 KMT2BQ9UMN6 2715 aaPredicted RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 CACNA1BQ00975 2339 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 SPTY2D1-AS1A0A0U1RR47 76 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 FAM149AA5PLN7 773 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 H3BM21 787 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 TRIM38O00635 465 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 PSTPIP1O43586 416 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 SIGLEC6O43699 453 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 LZTS3O60299 673 aaPredicted RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 SOCS5O75159 536 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 CPP00450 1065 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 C1SP09871 688 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 ALPPL2P10696 532 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 CDK4P11802 303 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 C6P13671 934 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 ZFXP17010 805 aaPredicted RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 CKMT2P17540 419 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 NFKBIAP25963 317 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 CDC25BP30305 580 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 IGFALSP35858 605 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 MMP12P39900 470 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 THOP1P52888 689 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 HADHBP55084 474 aaKnown RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 PFN3P60673 137 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 HNRNPKP61978 463 aaKnown RBP eCLIP15.48■□□□□ 0.07
VARS-219ENST00000461328 POLR2LP62875 67 aaKnown RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 DYNLT1P63172 113 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 ZNF211Q13398 564 aaPredicted RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 PTK2BQ14289 1009 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 SMAD1Q15797 465 aaKnown RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 PROX2Q3B8N5 592 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 TMEM52BQ4KMG9 183 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 KDM7AQ6ZMT4 941 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 KIAA1328Q86T90 577 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 VSIG1Q86XK7 387 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 CENPTQ96BT3 561 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 POLR1EQ9GZS1 481 aaKnown RBP15.48■□□□□ 0.07
VARS-219ENST00000461328 GOLPH3Q9H4A6 298 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 CAAP1Q9H8G2 361 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 NOD2Q9HC29 1040 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 DTLQ9NZJ0 730 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 IMPACTQ9P2X3 320 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms