RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 METTL18O95568 372 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 ABHD2P08910 425 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 HGFP14210 728 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC6A2P23975 617 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 HTR1BP28222 390 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 ATP5C1P36542 298 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DLG4P78352 724 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TMC8Q8IU68 726 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DNAJB14Q8TBM8 379 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 WNT8BQ93098 351 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PANX1Q96RD7 426 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 LACRTQ9GZZ8 138 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 MRPL17Q9NRX2 175 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PIH1D1Q9NWS0 290 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 UPB1Q9UBR1 384 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SAMD4AQ9UPU9 718 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TRPV2Q9Y5S1 764 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 METTL21EPA6NDL7 271 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 SIN3BO75182 1162 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 CES1P23141 567 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 KDELR1P24390 212 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 GRIA4P48058 902 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 GPR107Q5VW38 600 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PYHIN1Q6K0P9 492 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 FUKQ8N0W3 1084 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 DPF3Q92784 378 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RNF31Q96EP0 1072 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 CERS2Q96G23 380 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RAB21Q9UL25 225 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 BAIAP2Q9UQB8 552 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PRDM15P57071 1507 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 UNC5CO95185 931 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 FAM86B2P0C5J1 330 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RAB10P61026 200 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 STXBP1P61764 594 aaKnown RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 ERVK-9P63128 1117 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 BTN3A2P78410 334 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PFKPQ01813 784 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 DLG1Q12959 904 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 TCEAL6Q6IPX3 200 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 YTHDF3Q7Z739 585 aaKnown RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 NEUROD4Q9HD90 331 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF221Q9UK13 617 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 TBC1D3BA6NDS4 549 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 MOXD2PA6NHM9 499 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RFXANKO14593 260 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 FGBP02675 491 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 SERPINA6P08185 405 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PAX3P23760 479 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PSEN1P49768 467 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 SLC25A3Q00325 362 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RBM44Q6ZP01 1051 aaKnown RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 RTL4Q6ZR62 310 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 UNC93AQ86WB7 457 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 CCDC54Q8NEL0 328 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF563Q8TA94 476 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PIK3R3Q92569 461 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PPCDCQ96CD2 204 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 TBC1D24Q9ULP9 559 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 NADKO95544 446 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF286BP0CG31 522 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 PSMB4P28070 264 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 CD86P42081 329 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 CASP5P51878 434 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 TROAPQ12815 778 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 MFSD10Q14728 455 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF554Q86TJ5 538 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 TDRD1Q9BXT4 1180 aaKnown RBP9.03□□□□□ -0.96
BRCA1-205ENST00000461221 EHD4Q9H223 541 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 SETD4Q9NVD3 440 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 XPR1Q9UBH6 696 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 HPSEQ9Y251 543 aa9.03□□□□□ -0.96
BRCA1-205ENST00000461221 G3V2T6 193 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 ACKR2O00590 384 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 C9P02748 559 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 INSRRP14616 1297 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 TFEBP19484 476 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 PDHA2P29803 388 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.96
BRCA1-205ENST00000461221 IL18Q14116 193 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 ZFP69Q49AA0 526 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 FAM46CQ5VWP2 391 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 LIPMQ5VYY2 423 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 TAPT1Q6NXT6 567 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 DET1Q7L5Y6 550 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 PACS2Q86VP3 889 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 RAB43Q86YS6 212 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 MCEMP1Q8IX19 187 aa9.02□□□□□ -0.96
BRCA1-205ENST00000461221 SCUBE3Q8IX30 993 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms