RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 SLC2A14Q8TDB8 520 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 UBASH3BQ8TF42 649 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SMARCD1Q96GM5 515 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ADAM2Q99965 735 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MRPL45Q9BRJ2 306 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 UNKQ9C0B0 810 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 KATNBL1Q9H079 304 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 HIPK3Q9H422 1215 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ANKHQ9HCJ1 492 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZDHHC18Q9NUE0 388 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GDAP2Q9NXN4 497 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 DNPEPQ9ULA0 475 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 EIF3LQ9Y262 564 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RAP2CQ9Y3L5 183 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SH3PXD2BA1X283 911 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 EFCAB10A6NFE3 127 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 HAS3O00219 553 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SOAT2O75908 522 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PARNO95453 639 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ETS1P14921 441 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 LRPAP1P30533 357 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 UBE3AQ05086 875 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SULT2A1Q06520 285 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DCAF6Q58WW2 860 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 BTBD8Q5XKL5 378 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 C16orf46Q6P387 395 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ADGRD1Q6QNK2 874 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 FAM183BPQ6ZVS7 135 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 STRA8Q7Z7C7 330 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 STK32CQ86UX6 486 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MIER2Q8N344 545 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CD101Q93033 1021 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DGCR6LQ9BY27 220 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 EHD3Q9NZN3 535 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SPEF1Q9Y4P9 236 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CCDC154A6NI56 674 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 APOC4-APOC2K7ER74 178 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 BTN3A3O00478 584 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 HDAC3O15379 428 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TRUB2O95900 331 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 APOC2P02655 101 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SNRPB2P08579 225 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 NPR3P17342 541 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CCT8P50990 548 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TAS2R40P59535 323 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 YWHAZP63104 245 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ELAVL2Q12926 359 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 HERC3Q15034 1050 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SLC1A5Q15758 541 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 INSCQ1MX18 579 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ANO4Q32M45 955 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MARCH8Q5T0T0 291 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PPP1R26Q5T8A7 1209 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CES5AQ6NT32 575 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ANGPTL8Q6UXH0 198 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 BBS12Q6ZW61 710 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 RAB43Q86YS6 212 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TBC1D21Q8IYX1 336 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 IRGQQ8WZA9 623 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SLCO2A1Q92959 643 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PLEKHA8Q96JA3 519 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 KLHL32Q96NJ5 620 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CPXM1Q96SM3 734 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CDH19Q9H159 772 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 KLHL31Q9H511 634 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 GRHL1Q9NZI5 618 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PCDHGB4Q9UN71 923 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TDRKHQ9Y2W6 561 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 hCG_1818297A0A087WSY0 165 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TRIM64CA6NLI5 447 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PRRG1O14668 218 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 AOC2O75106 756 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TNFRSF21O75509 655 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CRTAMO95727 393 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 EDN1P05305 212 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CYBAP13498 195 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PTPN7P35236 360 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MAGEA10P43363 369 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 NR2C2P49116 596 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 WNT7BP56706 349 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TPI1P60174 286 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 VAC14Q08AM6 782 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 NME3Q13232 169 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 NFE2Q16621 373 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 C15orf59Q2T9L4 293 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 NEK5Q6P3R8 708 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DRICH1Q6PGQ1 229 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CRTC3Q6UUV7 619 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PLEKHM3Q6ZWE6 761 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 KBTBD2Q8IY47 623 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 C7orf61Q8IZ16 206 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CRYBG2Q8N1P7 616 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CNTD1Q8N815 330 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ACTRT2Q8TDY3 377 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MYDGFQ969H8 173 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PPP1R10Q96QC0 940 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms