RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MROH6A6NGR9 719 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ENO4A6NNW6 628 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SYCE1LA8MT33 242 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 A8MT66 165 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 PSMD12O00232 456 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SEPT4O43236 478 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 RAMP2O60895 175 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SRP72O76094 671 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CRTAMO95727 393 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 MT-CYBP00156 380 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SNRPB2P08579 225 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 FGF4P08620 206 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SBK3P0C264 359 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 UBTFL6P0CB48 400 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CYBAP13498 195 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ENO3P13929 434 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 GABRB3P28472 473 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 THPOP40225 353 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 GLRBP48167 497 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 MRPL19P49406 292 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SUOXP51687 545 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 THOP1P52888 689 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 AQP4P55087 323 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 FCGRTP55899 365 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ATP6V0D1P61421 351 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 USP46P62068 366 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 HERVK_113P63132 956 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SULT2A1Q06520 285 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 SREBF2Q12772 1141 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 BNIP2Q12982 314 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CTBP1Q13363 440 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 FASTKQ14296 549 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CSHL1Q14406 222 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 PABPC1LQ4VXU2 614 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 HECTD2Q5U5R9 776 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CWF19L1Q69YN2 538 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 GDF6Q6KF10 455 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CUZD1Q86UP6 607 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CLYBLQ8N0X4 340 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 PACRGLQ8N7B6 248 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 TXNDC5Q8NBS9 432 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 NETO2Q8NC67 525 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 AGR3Q8TD06 166 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF483Q8TF39 744 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 NCSTNQ92542 709 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CASP10Q92851 521 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 LPPQ93052 612 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 UBXN10Q96LJ8 280 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 CATSPER2Q96P56 530 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 TCF12Q99081 682 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 HOPXQ9BPY8 73 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ERVK-6Q9BXR3 956 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 EBF3Q9H4W6 596 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 WDR55Q9H6Y2 383 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF696Q9H7X3 374 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 TLR8Q9NR97 1041 aaKnown RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 MIOSQ9NXC5 875 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 IL37Q9NZH6 218 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ADAMTS6Q9UKP5 1117 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 NOD1Q9Y239 953 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 INPP5FQ9Y2H2 1132 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 TBC1D30Q9Y2I9 924 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-202ENST00000459727 PCDHB5Q9Y5E4 795 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 COMMD10Q9Y6G5 202 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 C15orf38-AP3S2A0A0A6YYH1 394 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 LOC285095A0A1B0GVY8 99 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 A0A1W2PQH9 124 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 KANSL1LA0AUZ9 987 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 FAM92AA1XBS5 289 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TCAF2A6NFQ2 919 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 DRGXA6NNA5 263 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TXNDC9O14530 226 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SKAP2O75563 359 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 RPP40O75818 363 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 GLP2RO95838 553 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CHEK2O96017 543 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 POMCP01189 267 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 PYGLP06737 847 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CTSHP09668 335 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CCDC166P0CW27 439 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 C7P10643 843 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 FCGR1AP12314 374 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CD9P21926 228 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CD52P31358 61 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 AVPR1AP37288 418 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ETFBP38117 255 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 BRCC3P46736 316 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 RPL5P46777 297 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CCNHP51946 323 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 PSME3P61289 254 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 RHDQ02161 417 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 FOLH1Q04609 750 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ITKQ08881 620 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ELAVL2Q12926 359 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TRIM25Q14258 630 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF235Q14590 738 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CCL14Q16627 93 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms