RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CHN1P15882 459 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 KRT4P19013 534 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 LTBRP36941 435 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 GRIA4P48058 902 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 SLC18A1P54219 525 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 CSE1LP55060 971 aaKnown RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 DNAJC3Q13217 504 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 GRIN2CQ14957 1233 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 SMAD1Q15797 465 aaKnown RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 QPCTQ16769 361 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 ARMC12Q5T9G4 340 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 EP400NLQ6ZTU2 488 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 YAF2Q8IY57 180 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 C4orf33Q8N1A6 199 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 CPA6Q8N4T0 437 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 OR13J1Q8NGT2 312 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 MDM1Q8TC05 714 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 PDCD6IPQ8WUM4 868 aaKnown RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 AGAP2Q99490 1192 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 HTRA2O43464 458 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 PRKCGP05129 697 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 GUCY1A3Q02108 690 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 BMPR2Q13873 1038 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 DLG2Q15700 870 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 TIFABQ6ZNK6 161 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 STRA8Q7Z7C7 330 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 PLPP6Q8IY26 295 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 RYBPQ8N488 228 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 OR6K2Q8NGY2 324 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 GABPB2Q8TAK5 448 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-204ENST00000459639 STYXQ8WUJ0 223 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 RBBP8Q99708 897 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 POMKQ9H5K3 350 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 HACD3Q9P035 362 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 PCDHB9Q9Y5E1 797 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 SPO11Q9Y5K1 396 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 HMX2A2RU54 273 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 FAM47DPA6NHR8 397 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 TRAFD1O14545 582 aaPredicted RBP24.55■■□□□ 1.52
U2AF1-204ENST00000459639 SRPRAP08240 638 aaKnown RBP24.55■■□□□ 1.52
U2AF1-204ENST00000459639 PSMC3P17980 439 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 SERPINA4P29622 427 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 THOC5Q13769 683 aaKnown RBP24.55■■□□□ 1.52
U2AF1-204ENST00000459639 TERF2Q15554 542 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 TAF1AQ15573 450 aaPredicted RBP24.55■■□□□ 1.52
U2AF1-204ENST00000459639 MYLK3Q32MK0 819 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 ACCSLQ4AC99 568 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 CARD16Q5EG05 197 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 CAMK1DQ8IU85 385 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 CALML6Q8TD86 181 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 CENPTQ96BT3 561 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 SERAC1Q96JX3 654 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 MRGPRX3Q96LB0 322 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 NECTIN4Q96NY8 510 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 SLCO3A1Q9UIG8 710 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 ARL5AQ9Y689 179 aa24.55■■□□□ 1.52
U2AF1-204ENST00000459639 OTOL1A6NHN0 477 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 SLC7A4O43246 635 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 ATP5BP06576 529 aaKnown RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 PIRTP0C851 137 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 SPRP35270 261 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 NNMTP40261 264 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 EPHB1P54762 984 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GNGT1P63211 74 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 SLC18A2Q05940 514 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 ADGRE1Q14246 886 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GRM3Q14832 879 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 UGP2Q16851 508 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 MROH9Q5TGP6 573 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GRAMD4Q6IC98 578 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GLT6D1Q7Z4J2 308 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 ST13P5Q8NFI4 369 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 CPEB1Q9BZB8 566 aaKnown RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 PLA2G2FQ9BZM2 168 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 INTS9Q9NV88 658 aaKnown RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 NKIRAS1Q9NYS0 192 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 DEC1Q9P2X7 70 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GGT7Q9UJ14 662 aa24.54■■□□□ 1.52
U2AF1-204ENST00000459639 MUC22E2RYF6 1773 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-204ENST00000459639 GOLGA8TH3BQL2 631 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 TYROBPO43914 113 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 ECI2O75521 394 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 PIGNO95427 931 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 ITGA2BP08514 1039 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 LIMK2P53671 638 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 RUNX3Q13761 415 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 SH2D5Q6ZV89 423 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 SMRP1Q8NCR6 262 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 PIH1D2Q8WWB5 315 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 KXD1Q9BQD3 176 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 MCMBPQ9BTE3 642 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 CIPCQ9C0C6 399 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 MFSD1Q9H3U5 465 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 SLC8A2Q9UPR5 921 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 KCTD3Q9Y597 815 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 TIMM44O43615 452 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 SPAG7O75391 227 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 RFPL1O75677 317 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 POP4O95707 220 aaKnown RBP24.53■■□□□ 1.52
U2AF1-204ENST00000459639 DLDP09622 509 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms