RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CCNJLQ8IV13 435 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 EXD3Q8N9H8 876 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 JOSD2Q8TAC2 188 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 FAM172AQ8WUF8 416 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 TSACCQ96A04 125 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-227ENST00000458564 PDXPQ96GD0 296 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 WDR92Q96MX6 357 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 APOOQ9BUR5 198 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 MAGEB5Q9BZ81 275 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 FOXP3Q9BZS1 431 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 B3GNT4Q9C0J1 378 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 KLC2Q9H0B6 622 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 LRRN3Q9H3W5 708 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 STARD5Q9NSY2 213 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 SIRPGQ9P1W8 387 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 LHX3Q9UBR4 397 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 KLQ9UEF7 1012 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 GPR34Q9UPC5 381 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CFAP69A5D8W1 941 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 JMJD7P0C870 316 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 UNGP13051 313 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-227ENST00000458564 GLB1P16278 677 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 CHRNB2P17787 502 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 XPAP23025 273 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-227ENST00000458564 EPHB2P29323 1055 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 AIF1P55008 147 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 KIAA1024LP59773 190 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 DPCR1Q3MIW9 517 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 ERAP2Q6P179 960 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 OGFOD3Q6PK18 319 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 ENPP7Q6UWV6 458 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 USP53Q70EK8 1073 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 SPRED1Q7Z699 444 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 SLFN11Q7Z7L1 901 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 UMODL1-AS1Q8N2C9 162 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 HMCESQ96FZ2 354 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 ZNF641Q96N77 438 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-227ENST00000458564 TUBGCP5Q96RT8 1024 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 SEMA3CQ99985 751 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 GANQ9H2C0 597 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 SUV39H2Q9H5I1 410 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 PDFQ9HBH1 243 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 PCDH12Q9NPG4 1184 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 ATP8A1Q9Y2Q0 1164 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 COQ6Q9Y2Z9 468 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 DAAM1Q9Y4D1 1078 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 LOXL2Q9Y4K0 774 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 SCN8AQ9UQD0 1980 aa10.51□□□□□ -0.73
HDLBP-227ENST00000458564 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 CYSRT1A8MQ03 144 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 RASA4BC9J798 803 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 PYCARD-AS1I3L0S3 204 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 TNFRSF10CO14798 259 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 INSIG1O15503 277 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 FGF10O15520 208 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 ARHGAP6O43182 974 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 RASA4O43374 803 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 NUDT21O43809 227 aaKnown RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 GFPT2O94808 682 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 PIGNO95427 931 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 HOXC4P09017 264 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 SFTPCP11686 197 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 KRT3P12035 628 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 HGFP14210 728 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 ITGB6P18564 788 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 CD82P27701 267 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 HTR7P34969 479 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 RFC1P35251 1148 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 LIG3P49916 1009 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 JAM2P57087 298 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 NFATC3Q12968 1075 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDLBP-227ENST00000458564 CYTH1Q15438 398 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 TGIF1Q15583 401 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 EFHC2Q5JST6 749 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 KCTD16Q68DU8 428 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 PRICKLE2Q7Z3G6 844 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 DTX1Q86Y01 620 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 ZNF354CQ86Y25 554 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 JAMLQ86YT9 394 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 SLITRK4Q8IW52 837 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 PYROXD2Q8N2H3 581 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 C3orf20Q8ND61 904 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 SLC30A5Q8TAD4 765 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 EXOC2Q96KP1 924 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 CMKLR1Q99788 373 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 NCAPGQ9BPX3 1015 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 LRRC19Q9H756 370 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 CATSPERBQ9H7T0 1116 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 FGF22Q9HCT0 170 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 DONSONQ9NYP3 566 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 SEPT10Q9P0V9 454 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 UBA2Q9UBT2 640 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms