RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NEK11Q8NG66 645 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 APOOQ9BUR5 198 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 STRADBQ9C0K7 418 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 GULP1Q9UBP9 304 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 LHX3Q9UBR4 397 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 EIF3CLB5ME19 914 aaKnown RBP21.71■■□□□ 1.07
CPNE1-220ENST00000458038 K7ENP7 123 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 EPHB6O15197 1021 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 CCP110O43303 1012 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 TNFSF15O95150 251 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 CCDC172P0C7W6 258 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 ITIH2P19823 946 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 CSNK1DP48730 415 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 NDST2P52849 883 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 SRP54P61011 504 aaKnown RBP21.71■■□□□ 1.07
CPNE1-220ENST00000458038 MTM1Q13496 603 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 CYTH1Q15438 398 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 INO80CQ6PI98 192 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-220ENST00000458038 EIF3CQ99613 913 aaKnown RBP21.71■■□□□ 1.07
CPNE1-220ENST00000458038 PCDH12Q9NPG4 1184 aa21.71■■□□□ 1.07
CPNE1-220ENST00000458038 TENM4Q6N022 2769 aa21.7■■□□□ 1.07
CPNE1-220ENST00000458038 TCRBV5S1A1TA0A578 114 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 PLD2O14939 933 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 INSIG1O15503 277 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 C6P13671 934 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 INPP5AQ14642 412 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 ALG11Q2TAA5 492 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 PPP1R2P3Q6NXS1 205 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 FOXR1Q6PIV2 292 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 ENPP7Q6UWV6 458 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 CCDC81Q6ZN84 652 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 TTC9Q92623 222 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 TSACCQ96A04 125 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-220ENST00000458038 WDR92Q96MX6 357 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 GFM1Q96RP9 751 aaKnown RBP21.7■■□□□ 1.06
CPNE1-220ENST00000458038 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.7■■□□□ 1.06
CPNE1-220ENST00000458038 KLQ9UEF7 1012 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 GPR34Q9UPC5 381 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 PCDHGA7Q9Y5G6 932 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 DGKBQ9Y6T7 804 aa21.7■■□□□ 1.06
CPNE1-220ENST00000458038 LRP4O75096 1905 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 ARHGAP42A6NI28 874 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 PRAMEF11O60813 436 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 PIGNO95427 931 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 TNFP01375 233 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 LIG3P49916 1009 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 TPI1P60174 286 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 POLR2LP62875 67 aaKnown RBP21.69■■□□□ 1.06
CPNE1-220ENST00000458038 DCUN1D2Q6PH85 259 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 PCDH19Q8TAB3 1148 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 PCMTD1Q96MG8 357 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-220ENST00000458038 TMEM74Q96NL1 305 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 MCEEQ96PE7 176 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 RBM15Q96T37 977 aaKnown RBP eCLIP21.69■■□□□ 1.066e-9■■■□□ 15.1
CPNE1-220ENST00000458038 AGPAT1Q99943 283 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 LRRC19Q9H756 370 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 ATP13A3Q9H7F0 1226 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 SEPT11Q9NVA2 429 aaKnown RBP21.69■■□□□ 1.06
CPNE1-220ENST00000458038 ATP8A1Q9Y2Q0 1164 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 COQ6Q9Y2Z9 468 aa21.69■■□□□ 1.06
CPNE1-220ENST00000458038 J3QKU1 62 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 SERPINA4P29622 427 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 MMP12P39900 470 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 PDX1P52945 283 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 COPB1P53618 953 aaKnown RBP21.68■■□□□ 1.06
CPNE1-220ENST00000458038 RPL7AP62424 266 aaKnown RBP21.68■■□□□ 1.06
CPNE1-220ENST00000458038 PPP1R15BQ5SWA1 713 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 FBXO39Q8N4B4 442 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 KYQ8NBH2 561 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 CCDC74AQ96AQ1 378 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 EXOC2Q96KP1 924 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 CCNL2Q96S94 520 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-220ENST00000458038 SYNDIG1Q9H7V2 258 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 PDFQ9HBH1 243 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 FANCLQ9NW38 375 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 ANKRD36A6QL64 1941 aa21.68■■□□□ 1.06
CPNE1-220ENST00000458038 ARHGEF17Q96PE2 2063 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-220ENST00000458038 LRRC10BA6NIK2 292 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 LGALS16A8MUM7 142 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 D6RAR5 112 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 TNFRSF10CO14798 259 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 CELA2BP08218 269 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-220ENST00000458038 HOXC4P09017 264 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-220ENST00000458038 KELP23276 732 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 CCKBRP32239 447 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 NSUN2Q08J23 767 aaKnown RBP eCLIP21.67■■□□□ 1.06
CPNE1-220ENST00000458038 ACAD10Q6JQN1 1059 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 RAB11FIP2Q7L804 512 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 RD3Q7Z3Z2 195 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 SRLQ86TD4 932 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 NETO2Q8NC67 525 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 TMEM159Q96B96 161 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 MED8Q96G25 268 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 ERGIC2Q96RQ1 377 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 SIRPGQ9P1W8 387 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 LIMA1Q9UHB6 759 aaKnown RBP21.67■■□□□ 1.06
CPNE1-220ENST00000458038 APPL1Q9UKG1 709 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 ACSL6Q9UKU0 697 aa21.67■■□□□ 1.06
CPNE1-220ENST00000458038 ATXN7L1Q9ULK2 861 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-220ENST00000458038 OR1A2Q9Y585 309 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms