RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SLC26A3P40879 764 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ARSDP51689 593 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 SESN3P58005 492 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ZNF235Q14590 738 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 LSM12Q3MHD2 195 aaKnown RBP16.77■□□□□ 0.28
CCDC43-202ENST00000457422 HECTD2Q5U5R9 776 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 C1orf146Q5VVC0 180 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 LRRC74BQ6ZQY2 392 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 FRMD7Q6ZUT3 714 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ACAD11Q709F0 780 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 CFAP52Q8N1V2 620 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 NRG4Q8WWG1 115 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 SCG3Q8WXD2 468 aaKnown RBP16.77■□□□□ 0.28
CCDC43-202ENST00000457422 OVCA2Q8WZ82 227 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 CCDC126Q96EE4 140 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 UBXN10Q96LJ8 280 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 MAGEH1Q9H213 219 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ZNF385DQ9H6B1 395 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 BATF3Q9NR55 127 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 NMRK1Q9NWW6 199 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 RIMKLBQ9ULI2 386 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ARHGAP26Q9UNA1 814 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 TANC1Q9C0D5 1861 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 GOLGA8QA0A0J9YX86 632 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.77■□□□□ 0.27
CCDC43-202ENST00000457422 GOLGA8OA6NCC3 632 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 GOLGA8NF8WBI6 632 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 NVLO15381 856 aaKnown RBP16.77■□□□□ 0.27
CCDC43-202ENST00000457422 ACSL4O60488 711 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 LUC7L3O95232 432 aaKnown RBP16.77■□□□□ 0.27
CCDC43-202ENST00000457422 S1PR4O95977 384 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 RBP1P09455 135 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 ITGAXP20702 1163 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 PRAMEP78395 509 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 CSHL1Q14406 222 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 PTAR1Q7Z6K3 402 aaPredicted RBP16.77■□□□□ 0.27
CCDC43-202ENST00000457422 KDM1BQ8NB78 822 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 HDAC10Q969S8 669 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 SGF29Q96ES7 293 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 ZNF333Q96JL9 665 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 ANGPTL2Q9UKU9 493 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 CDYLQ9Y232 598 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 KCTD3Q9Y597 815 aa16.77■□□□□ 0.27
CCDC43-202ENST00000457422 NEMP1O14524 444 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 KIF3CO14782 793 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 FKBP6O75344 327 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 EFEMP2O95967 443 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 HOXD9P28356 352 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 EPHA3P29320 983 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 SLC6A4P31645 630 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 ATP5C1P36542 298 aaKnown RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 ACAP2Q15057 778 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 DEFB115Q30KQ5 88 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 RALGPS1Q5JS13 557 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 KLC3Q6P597 504 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 TRIM67Q6ZTA4 783 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 CCNYL1Q8N7R7 359 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 PDZD8Q8NEN9 1154 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 SHKBP1Q8TBC3 707 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 DTX3LQ8TDB6 740 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 DNAJC9Q8WXX5 260 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 IFT43Q96FT9 208 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 MAELQ96JY0 434 aaKnown RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 PPP1R36Q96LQ0 422 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 NUF2Q9BZD4 464 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 WDR55Q9H6Y2 383 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 VWA7Q9Y334 891 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 OR51F1A6NGY5 319 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 CLNS1AP54105 237 aaKnown RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 PEX6Q13608 980 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 AAGABQ6PD74 315 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 SETD3Q86TU7 594 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 LDB1Q86U70 411 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 LRRC43Q8N309 656 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 GPR150Q8NGU9 434 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 OR6P1Q8NGX9 317 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 LENG8Q96PV6 779 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 MGME1Q9BQP7 344 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 OSBPL1AQ9BXW6 950 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 MARCH4Q9P2E8 410 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 CDH22Q9UJ99 828 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-202ENST00000457422 SCN5AQ14524 2016 aa16.76■□□□□ 0.27
CCDC43-202ENST00000457422 LOC100653049A0A140TA62 436 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 KRT34O76011 436 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 CCDC166P0CW27 439 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 THRAP10827 490 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 HOXB8P17481 243 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-202ENST00000457422 RPL17P18621 184 aaKnown RBP16.75■□□□□ 0.27
CCDC43-202ENST00000457422 PIK3R1P27986 724 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 PPARGP37231 505 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms