RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PTK2BQ14289 1009 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 PRAMEF14Q5SWL7 426 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 SLC9A4Q6AI14 798 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 MAML1Q92585 1016 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 RBM41Q96IZ5 413 aaKnown RBP23.34■■□□□ 1.33
CBX3-204ENST00000456948 CNTNAP3BQ96NU0 1288 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 CNTNAP3Q9BZ76 1288 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 NOD2Q9HC29 1040 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 DTLQ9NZJ0 730 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 GGT7Q9UJ14 662 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 PHTF1Q9UMS5 762 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 APOBEC2Q9Y235 224 aaKnown RBP23.34■■□□□ 1.33
CBX3-204ENST00000456948 TMEM131Q92545 1883 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 CETN2P41208 172 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 YPEL5P62699 121 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 IL9RQ01113 521 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 ARMC12Q5T9G4 340 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 RAD9BQ6WBX8 426 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 GCNT7Q6ZNI0 430 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 SPATS2Q86XZ4 545 aaKnown RBP23.33■■□□□ 1.33
CBX3-204ENST00000456948 CCDC50Q8IVM0 306 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 KATNAL2Q8IYT4 538 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 OR13H1Q8NG92 308 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 TPCN2Q8NHX9 752 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 KIAA1524Q8TCG1 905 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 SPOCK2Q92563 424 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 BMFQ96LC9 184 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 CAMK1GQ96NX5 476 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 SEMA3CQ99985 751 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 KCTD5Q9NXV2 234 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 TTLL3Q9Y4R7 772 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 PCDHGC4Q9Y5F7 938 aa23.33■■□□□ 1.33
CBX3-204ENST00000456948 C3orf70A6NLC5 250 aaPredicted RBP23.32■■□□□ 1.32
CBX3-204ENST00000456948 TRAFD1O14545 582 aaPredicted RBP23.32■■□□□ 1.32
CBX3-204ENST00000456948 MAP3K6O95382 1288 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 CYP2A6P11509 494 aaPredicted RBP23.32■■□□□ 1.32
CBX3-204ENST00000456948 LIG3P49916 1009 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 THOP1P52888 689 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 MAXP61244 160 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 FGL2Q14314 439 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 LRRC14Q15048 493 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 PGBD5Q8N414 524 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 PLD5Q8N7P1 536 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 SAP25Q8TEE9 199 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 CENPTQ96BT3 561 aa23.32■■□□□ 1.32
CBX3-204ENST00000456948 ANKRD36A6QL64 1941 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 SPAARA0A1B0GVQ0 90 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 H3BM21 787 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 SPINT1O43278 529 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 HTRA2O43464 458 aaPredicted RBP23.31■■□□□ 1.32
CBX3-204ENST00000456948 CPP00450 1065 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 ELFN1P0C7U0 828 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 ITIH2P19823 946 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 EPHA8P29322 1005 aaPredicted RBP23.31■■□□□ 1.32
CBX3-204ENST00000456948 MMP12P39900 470 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 PPIDQ08752 370 aaKnown RBP23.31■■□□□ 1.32
CBX3-204ENST00000456948 AP1B1Q10567 949 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 TFDP3Q5H9I0 405 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 MFSD7Q6UXD7 560 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 GLRX5Q86SX6 157 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 EXD1Q8NHP7 514 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 KLF6Q99612 283 aaPredicted RBP23.31■■□□□ 1.32
CBX3-204ENST00000456948 FTSJ1Q9UET6 329 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 ANGPTL2Q9UKU9 493 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 TFR2Q9UP52 801 aa23.31■■□□□ 1.32
CBX3-204ENST00000456948 POM121BA6NF01 834 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 NEMP2A6NFY4 417 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 RAD51BO15315 384 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 PJA2O43164 708 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 CBFA2T3O75081 653 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 C6P13671 934 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 TGM2P21980 687 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 CDKN2BP42772 138 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 COPS2P61201 443 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 HNRNPKP61978 463 aaKnown RBP eCLIP23.3■■□□□ 1.32
CBX3-204ENST00000456948 DYNLT1P63172 113 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 SLC10A2Q12908 348 aaPredicted RBP23.3■■□□□ 1.32
CBX3-204ENST00000456948 SPOCD1Q6ZMY3 1216 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 USP45Q70EL2 814 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 SYCE1Q8N0S2 351 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 ATL2Q8NHH9 583 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 RAI2Q9Y5P3 530 aa23.3■■□□□ 1.32
CBX3-204ENST00000456948 TP53BP1Q12888 1972 aaPredicted RBP23.3■■□□□ 1.32
CBX3-204ENST00000456948 SPTY2D1-AS1A0A0U1RR47 76 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 TTC24A2A3L6 582 aaPredicted RBP23.29■■□□□ 1.32
CBX3-204ENST00000456948 TNFSF14O43557 240 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 NRDCO43847 1150 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 CST8O60676 142 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 PGLSO95336 258 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 JCHAINP01591 159 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 HTR1BP28222 390 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 PMLP29590 882 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 EPHB1P54762 984 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 PDE1CQ14123 709 aaPredicted RBP23.29■■□□□ 1.32
CBX3-204ENST00000456948 ARHGEF7Q14155 803 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 AGERQ15109 404 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 KAZNQ674X7 775 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 DPPA4Q7L190 304 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 PARGQ86W56 976 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 ZSWIM9Q86XI8 627 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms