RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SCNN1BP51168 640 aa18■□□□□ 0.47
MSH6-207ENST00000456246 TXNRD3NBQ6F5E7 133 aa18■□□□□ 0.47
MSH6-207ENST00000456246 MACC1Q6ZN28 852 aa18■□□□□ 0.47
MSH6-207ENST00000456246 ARHGAP36Q6ZRI8 547 aa18■□□□□ 0.47
MSH6-207ENST00000456246 ZNF548Q8NEK5 533 aaPredicted RBP18■□□□□ 0.47
MSH6-207ENST00000456246 ATL2Q8NHH9 583 aa18■□□□□ 0.47
MSH6-207ENST00000456246 RFFLQ8WZ73 363 aa18■□□□□ 0.47
MSH6-207ENST00000456246 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
MSH6-207ENST00000456246 HAUS2Q9NVX0 235 aa18■□□□□ 0.47
MSH6-207ENST00000456246 SPASTQ9UBP0 616 aa18■□□□□ 0.47
MSH6-207ENST00000456246 SRRM3A6NNA2 597 aaPredicted RBP17.99■□□□□ 0.47
MSH6-207ENST00000456246 TPP1O14773 563 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 AQP9O43315 295 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 AKR1B10O60218 316 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 MAFKO60675 156 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 CAPNS1P04632 268 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 KRT7P08729 469 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 CKMT1AP12532 417 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 JUPP14923 745 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 MAN1A1P33908 653 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 BLKP51451 505 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 SLC10A7Q0GE19 358 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 PDK2Q15119 407 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 IRF4Q15306 451 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 ZCCHC8Q6NZY4 707 aaKnown RBP17.99■□□□□ 0.47
MSH6-207ENST00000456246 VSTM4Q8IW00 320 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 MAP7D3Q8IWC1 876 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 NUDCD1Q96RS6 583 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 MGME1Q9BQP7 344 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 ZNF670Q9BS34 389 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 ABHD10Q9NUJ1 306 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 APOBEC3BQ9UH17 382 aaKnown RBP17.99■□□□□ 0.47
MSH6-207ENST00000456246 ANKRD36A6QL64 1941 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 PKD1L2Q7Z442 2459 aa17.99■□□□□ 0.47
MSH6-207ENST00000456246 APC2O95996 2303 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 K7ESM1 405 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
MSH6-207ENST00000456246 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
MSH6-207ENST00000456246 PEX11BO96011 259 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 GP1BAP07359 652 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 TMEM253P0C7T8 217 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 ITIH2P19823 946 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 HTR1BP28222 390 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 LIG3P49916 1009 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 MTM1Q13496 603 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 CAMK2BQ13554 666 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 ASTE1Q2TB18 679 aaPredicted RBP17.98■□□□□ 0.47
MSH6-207ENST00000456246 WSCD2Q2TBF2 565 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 HES3Q5TGS1 186 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 MARC1Q5VT66 337 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 DPPA4Q7L190 304 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 ZSWIM9Q86XI8 627 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 PHACTR4Q8IZ21 702 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 SLC13A1Q9BZW2 595 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 MBNL1Q9NR56 388 aaKnown RBP17.98■□□□□ 0.47
MSH6-207ENST00000456246 KCTD5Q9NXV2 234 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 SALL4Q9UJQ4 1053 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 FREM2Q5SZK8 3169 aa17.98■□□□□ 0.47
MSH6-207ENST00000456246 FAM149AA5PLN7 773 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 TRABD2BA6NFA1 517 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 MUSKO15146 869 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
MSH6-207ENST00000456246 MFAP3LO75121 409 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 ELFN1P0C7U0 828 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 CR2P20023 1033 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 MMP13P45452 471 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 ARSEP51690 589 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 PPARDQ03181 441 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 EIF2B5Q13144 721 aaKnown RBP17.97■□□□□ 0.47
MSH6-207ENST00000456246 DPYSL3Q14195 570 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 TIGD7Q6NT04 549 aaPredicted RBP17.97■□□□□ 0.47
MSH6-207ENST00000456246 CNGA4Q8IV77 575 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 TP53INP2Q8IXH6 220 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 KCTD6Q8NC69 237 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 LMX1AQ8TE12 382 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 GLMNQ92990 594 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 NXPE2Q96DL1 559 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 APOLD1Q96LR9 279 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 CCDC42Q96M95 316 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 IL12RB2Q99665 862 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 SCUBE2Q9NQ36 999 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 FAM208BQ5VWN6 2430 aa17.97■□□□□ 0.47
MSH6-207ENST00000456246 LRRK1Q38SD2 2015 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 IL4RP24394 825 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 NFATC4Q14934 902 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
MSH6-207ENST00000456246 TPRG1LQ5T0D9 272 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 RHOT2Q8IXI1 618 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 SDR16C5Q8N3Y7 309 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 FATE1Q969F0 183 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 AMACRQ9UHK6 382 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 KLF15Q9UIH9 416 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 CLCA2Q9UQC9 943 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 COQ6Q9Y2Z9 468 aa17.96■□□□□ 0.47
MSH6-207ENST00000456246 CHD6Q8TD26 2715 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 DMXL2Q8TDJ6 3036 aa17.95■□□□□ 0.46
MSH6-207ENST00000456246 LMO7DNF2Z398 122 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms