RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ECHDC3Q96DC8 303 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 CCDC42Q96M95 316 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 SCUBE2Q9NQ36 999 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 MBNL1Q9NR56 388 aaKnown RBP10.76□□□□□ -0.69
DDX39A-203ENST00000454233 ABHD10Q9NUJ1 306 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 SPASTQ9UBP0 616 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 CSNK1G3Q9Y6M4 447 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 KMT2BQ9UMN6 2715 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 KNTC1P50748 2209 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 CFAP69A5D8W1 941 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 TRABD2BA6NFA1 517 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 SRRM3A6NNA2 597 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 K7ESM1 405 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MUSKO15146 869 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MFAP3LO75121 409 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 NEBLO76041 1014 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PRKCGP05129 697 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 KRT7P08729 469 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ELFN1P0C7U0 828 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 CKMT1AP12532 417 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 HTR1BP28222 390 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MMP13P45452 471 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PEX5P50542 639 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 BLKP51451 505 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 EIF2B5Q13144 721 aaKnown RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MMRN1Q13201 1228 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PDK2Q15119 407 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ASTE1Q2TB18 679 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 WSCD2Q2TBF2 565 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 TPRG1LQ5T0D9 272 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 FAXCQ5TGI0 409 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 HES3Q5TGS1 186 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MACC1Q6ZN28 852 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ZSWIM9Q86XI8 627 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PROSER1Q86XN7 944 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 MARCH9Q86YJ5 346 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 CNGA4Q8IV77 575 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PHACTR4Q8IZ21 702 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 FAM181AQ8N9Y4 354 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ATL2Q8NHH9 583 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 FAM71BQ8TC56 605 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 LMX1AQ8TE12 382 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PDCD6IPQ8WUM4 868 aaKnown RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 APOLD1Q96LR9 279 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 TBATAQ96M53 351 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 NUDCD1Q96RS6 583 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 IL12RB2Q99665 862 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ZNF670Q9BS34 389 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 ANP32EQ9BTT0 268 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 PACSIN1Q9BY11 444 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 SLC13A1Q9BZW2 595 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 USP29Q9HBJ7 922 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 HAUS2Q9NVX0 235 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 NCKIPSDQ9NZQ3 722 aa10.75□□□□□ -0.69
DDX39A-203ENST00000454233 APOBEC3BQ9UH17 382 aaKnown RBP10.75□□□□□ -0.69
DDX39A-203ENST00000454233 TRAFD1O14545 582 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 TPP1O14773 563 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 SOCS5O75159 536 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PEX11BO96011 259 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 CPP00450 1065 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PCCBP05166 539 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ANXA6P08133 673 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 CD48P09326 243 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 GIMD1P0DJR0 217 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 IL4RP24394 825 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 MAN1A1P33908 653 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ARSEP51690 589 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ADKP55263 362 aaKnown RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 SEMG2Q02383 582 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PPARDQ03181 441 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ITKQ08881 620 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 MTM1Q13496 603 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 DPYSL3Q14195 570 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 INPP5AQ14642 412 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 MESDQ14696 234 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PAFAH1B3Q15102 231 aaKnown RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 AGERQ15109 404 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ATP13A4Q4VNC1 1196 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PRRT3Q5FWE3 981 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 RALGPS1Q5JS13 557 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 TIGD7Q6NT04 549 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 ZCCHC8Q6NZY4 707 aaKnown RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 DPPA4Q7L190 304 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 RBFAQ8N0V3 343 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 MDM1Q8TC05 714 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 GLMNQ92990 594 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 MGME1Q9BQP7 344 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 APOOQ9BUR5 198 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 CAAP1Q9H8G2 361 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 NHEJ1Q9H9Q4 299 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-203ENST00000454233 NOD2Q9HC29 1040 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 KLF15Q9UIH9 416 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 DOLKQ9UPQ8 538 aa10.74□□□□□ -0.69
DDX39A-203ENST00000454233 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms