RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FAM114A1Q8IWE2 563 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 KIAA1524Q8TCG1 905 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 GPBAR1Q8TDU6 330 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 TUBGCP5Q96RT8 1024 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 WRAP53Q9BUR4 548 aaKnown RBP14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 NDFIP2Q9NV92 336 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 DNAI1Q9UI46 699 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 NEU3Q9UQ49 428 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 LRP4O75096 1905 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 GOLGA8SH3BPF8 625 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CACNB4O00305 520 aaPredicted RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 PDE2AO00408 941 aaPredicted RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CPNE6O95741 557 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 HGFP14210 728 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 MTIF2P46199 727 aaKnown RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 ATP11AP98196 1134 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 APBA1Q02410 837 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 PEX6Q13608 980 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 ARHGEF7Q14155 803 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 INPP5AQ14642 412 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 COLEC12Q5KU26 742 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 ATXN7L2Q5T6C5 722 aaPredicted RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 TRNP1Q6NT89 227 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CCDC112Q8NEF3 446 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 OR56A4Q8NGH8 313 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CENPIQ92674 756 aaPredicted RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 TSACCQ96A04 125 aaPredicted RBP14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 HMCESQ96FZ2 354 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 NCAPGQ9BPX3 1015 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 TRIM4Q9C037 500 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 WDR70Q9NW82 654 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 KCTD5Q9NXV2 234 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 PCDHGA3Q9Y5H0 932 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 ACTL7AQ9Y615 435 aa14.4□□□□□ -0.1
LYSMD3-202ENST00000453259 CASC3O15234 703 aaKnown RBP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 CAPN5O15484 640 aaPredicted RBP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 PLEKP08567 350 aaPredicted RBP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 HTR7P34969 479 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 MMP12P39900 470 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 STAT1P42224 750 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 AIF1P55008 147 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 NOMO3P69849 1222 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 TRA2AQ13595 282 aaKnown RBP eCLIP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 NR1D2Q14995 579 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 BORAQ6PGQ7 559 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 ZNF438Q7Z4V0 828 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 PIM3Q86V86 326 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 IRF2BP1Q8IU81 584 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 CREBRFQ8IUR6 639 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 RTL3Q8N8U3 475 aaKnown RBP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM46DQ8NEK8 389 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 USP7Q93009 1102 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 PDXPQ96GD0 296 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 FUCA2Q9BTY2 467 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 CDH19Q9H159 772 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 NDST4Q9H3R1 872 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 SUV39H2Q9H5I1 410 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 LRIT1Q9P2V4 623 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 AJAP1Q9UKB5 411 aaPredicted RBP14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 RNF215Q9Y6U7 377 aa14.39□□□□□ -0.11
LYSMD3-202ENST00000453259 C2CD4BA6NLJ0 364 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 C9orf172C9J069 976 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 ITIH1P19827 911 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 MMP8P22894 467 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 GPR3P46089 330 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 CSNK1DP48730 415 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 LIG3P49916 1009 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 GSCP56915 257 aaPredicted RBP14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 TLE1Q04724 770 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 SERINC3Q13530 473 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 LRRC73Q5JTD7 316 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 TAF8Q7Z7C8 310 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 ZNF354CQ86Y25 554 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 UMODL1-AS1Q8N2C9 162 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 MLKLQ8NB16 471 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 ZNF564Q8TBZ8 553 aaPredicted RBP14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 EPS8L1Q8TE68 723 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 DPYSL5Q9BPU6 564 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 CATSPERBQ9H7T0 1116 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 PCDH12Q9NPG4 1184 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 METTL5Q9NRN9 209 aaKnown RBP14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 FOXJ2Q9P0K8 574 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 ATP8A1Q9Y2Q0 1164 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 OR1A2Q9Y585 309 aa14.38□□□□□ -0.11
LYSMD3-202ENST00000453259 WASH4PA8MWX3 477 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM72CH0Y354 149 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 FGF10O15520 208 aaPredicted RBP14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 PNMA6AP0CW24 399 aaPredicted RBP14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 EPHB2P29323 1055 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 TRIM23P36406 574 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 MAPK10P53779 464 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 POLR2LP62875 67 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms