RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 MAFKO60675 156 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 CLIC3O95833 236 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 SNRPB2P08579 225 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 CCDC166P0CW27 439 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 SMIM10L2AP0DMW4 78 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 SMIM10L2BP0DMW5 78 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 CHRM3P20309 590 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 LRPAP1P30533 357 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 DNAJB13P59910 316 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 COG7P83436 770 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PFKPQ01813 784 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 STX5Q13190 355 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 SNX17Q15036 470 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 ARTNQ5T4W7 220 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 LPCAT2Q7L5N7 544 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 EPHX4Q8IUS5 362 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 C3orf58Q8NDZ4 430 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PGAP3Q96FM1 320 aaPredicted RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 MRGPRX2Q96LB1 330 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 SENP8Q96LD8 212 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 RANBP9Q96S59 729 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 MUC3BQ9H195 1237 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 TTC24A2A3L6 582 aaPredicted RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 LRRC14BA6NHZ5 514 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 NRP2O60462 931 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 TPST1O60507 370 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 IPO13O94829 963 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 ADARP55265 1226 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 CDH13P55290 713 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 ZBTB49Q6ZSB9 765 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PIM3Q86V86 326 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PPHLN1Q8NEY8 458 aaKnown RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 RNF34Q969K3 372 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 UHRF1Q96T88 793 aaPredicted RBP12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PAAF1Q9BRP4 392 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 EGFL7Q9UHF1 273 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 MYRFQ9Y2G1 1151 aa12.65□□□□□ -0.38
THUMPD3-206ENST00000452837 PFDN1O60925 122 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 IREB2P48200 963 aaKnown RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 CDK9P50750 372 aaKnown RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 AIF1P55008 147 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 IHHQ14623 411 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 UGP2Q16851 508 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 KLC3Q6P597 504 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 POTEHQ6S545 545 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 RMND5BQ96G75 393 aaPredicted RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 FCRL5Q96RD9 977 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 IPO11Q9UI26 975 aaKnown RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 OR51F1A6NGY5 319 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 NME4O00746 187 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 TREHO43280 583 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 AKAP10O43572 662 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 GPC4O75487 556 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 SOX11P35716 441 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 KLHL35Q6PF15 583 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 LARP4Q71RC2 724 aaKnown RBP eCLIP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 ALG9Q9H6U8 611 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 SMOXQ9NWM0 555 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 ARHGEF38Q9NXL2 777 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 NUDT5Q9UKK9 219 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 AAR2Q9Y312 384 aaKnown RBP12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 TRAF6Q9Y4K3 522 aa12.64□□□□□ -0.39
THUMPD3-206ENST00000452837 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 SLC12A2P55011 1212 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 CDKN2DP55273 166 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 FOXA1P55317 472 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 TRAP1Q12931 704 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 TMED1Q13445 227 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 DCTN2Q13561 401 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 CAPRIN1Q14444 709 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 LPIN1Q14693 890 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 DCLRE1AQ6PJP8 1040 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 DQX1Q8TE96 717 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 SNRNP27Q8WVK2 155 aaKnown RBP12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 TFAP2CQ92754 450 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 IL12RB2Q99665 862 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 PNPLA3Q9NST1 481 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
THUMPD3-206ENST00000452837 A0A087X1B8 175 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms