RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MAPK13O15264 365 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RGS10O43665 173 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RANBP6O60518 1105 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CIB2O75838 187 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HEXIM1O94992 359 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCCBP05166 539 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABHD2P08910 425 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM86B2P0C5J1 330 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ANXA8P13928 327 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CHN1P15882 459 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HNRNPA2B1P22626 353 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 IGFBP6P24592 240 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 YY1P25490 414 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCSK1P29120 753 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MAGEA8P43361 318 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABCG1P45844 678 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR1G1P47890 313 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 KCNJ1P48048 391 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 AP3M2P53677 418 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 NPEPPSP55786 919 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CARD18P57730 90 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAC3P60763 192 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRR5P85299 388 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CEBPEQ15744 281 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLPPQ16740 277 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCDC142Q17RM4 750 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MCMDC2Q4G0Z9 681 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 AARDQ4LEZ3 155 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBLN7Q53RD9 439 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HERC4Q5GLZ8 1057 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CFAP157Q5JU67 520 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MANEALQ5VSG8 457 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ANXA8L1Q5VT79 327 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TCERG1LQ5VWI1 586 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ANKRD40Q6AI12 368 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 NEK5Q6P3R8 708 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PACS1Q6VY07 963 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 KIF6Q6ZMV9 814 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PIK3AP1Q6ZUJ8 805 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 VASH2Q86V25 355 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 AMIGO3Q86WK7 504 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CFAP206Q8IYR0 622 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEFF1Q8IYR6 380 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM9CQ8IZT9 166 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PTGR2Q8N8N7 351 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM133AQ8N9E0 248 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 EIF1ADQ8N9N8 165 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBXO18Q8NFZ0 1043 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR7D4Q8NG98 312 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF671Q8TAW3 534 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRAPLQ8TC17 118 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 SGCDQ92629 289 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLAMF9Q96A28 289 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MRPL38Q96DV4 380 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MCRS1Q96EZ8 462 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TSPAN17Q96FV3 270 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PEX11GQ96HA9 241 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 IFT74Q96LB3 600 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 LINC00615Q96LM1 132 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM227BQ96M60 508 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HS6ST2Q96MM7 605 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TTC25Q96NG3 672 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 MAP7D2Q96T17 732 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAD9AQ99638 391 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 GPR20Q99678 358 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RIOK1Q9BRS2 568 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 EDEM2Q9BV94 578 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TLR10Q9BXR5 811 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CAPS2Q9BXY5 557 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF341Q9BYN7 854 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRIM2Q9C040 744 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 C11orf54Q9H0W9 315 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 XYLT2Q9H1B5 865 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 GLT8D2Q9H1C3 349 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HRH4Q9H3N8 390 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 TFB2MQ9H5Q4 396 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 HAUS4Q9H6D7 363 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 XPNPEP3Q9NQH7 507 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRMT8Q9NR22 394 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARL8BQ9NVJ2 186 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 DNAJC17Q9NVM6 304 aaKnown RBP4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAB20Q9NX57 234 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 OGFRQ9NZT2 677 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RCE1Q9Y256 329 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 STK38LQ9Y2H1 464 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCDHB4Q9Y5E5 795 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAD54BQ9Y620 910 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 AOX1Q06278 1338 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NPHP3Q7Z494 1330 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ADAMTS20P59510 1910 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 EDDM13A0A1B0GTR0 161 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 A0A1W2PR48 441 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 AGAP5A6NIR3 686 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ACOD1A6NK06 481 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF785A8K8V0 405 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 KDM4EB2RXH2 506 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SNAP23O00161 211 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms