RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PRKCGP05129 697 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 THEGLP0DJG4 465 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 GIMD1P0DJR0 217 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 MX2P20592 715 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 EPHA8P29322 1005 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 IGFALSP35858 605 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 NOP2P46087 812 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 PEX5P50542 639 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 VAV2P52735 878 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 MAXP61244 160 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 ELP6Q0PNE2 266 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 SGCGQ13326 291 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 FZD2Q14332 565 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 TRIP6Q15654 476 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 WSCD2Q2TBF2 565 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 DCP2Q8IU60 420 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 KATNAL2Q8IYT4 538 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 SLC25A45Q8N413 288 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 PIH1D2Q8WWB5 315 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 IFT43Q96FT9 208 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 LGMNQ99538 433 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 MYOCQ99972 504 aa16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 PNMA8BQ9ULN7 279 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-205ENST00000452128 TMEM131Q92545 1883 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 SPTY2D1-AS1A0A0U1RR47 76 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 A6NNZ2 444 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 NEMP1O14524 444 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 PGLSO95336 258 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 KRT1P04264 644 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 MMP2P08253 660 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 CCNB1P14635 433 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 LIG3P49916 1009 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 IFI35P80217 286 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 IL9RQ01113 521 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 SEMG2Q02383 582 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 ZNF235Q14590 738 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 SUZ12Q15022 739 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 TIGD7Q6NT04 549 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 NPNTQ6UXI9 565 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 LIPIQ6XZB0 460 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 SPOCD1Q6ZMY3 1216 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 DPPA4Q7L190 304 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 SLCO6A1Q86UG4 719 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 GATAD2AQ86YP4 633 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 OXR1Q8N573 874 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 TADA1Q96BN2 335 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 CALR3Q96L12 384 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 MCCC1Q96RQ3 725 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 WRAP53Q9BUR4 548 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 NT5MQ9NPB1 228 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 RBM22Q9NW64 420 aaKnown RBP eCLIP16.21■□□□□ 0.193e-6■■■■■ 29.5
SCAMP4-205ENST00000452128 KLF15Q9UIH9 416 aa16.21■□□□□ 0.19
SCAMP4-205ENST00000452128 A0A1W2PQ67 120 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 FAM221BA6H8Z2 402 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 YKT6O15498 198 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 SPOPO43791 374 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 TM7SF2O76062 418 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 TOP3BO95985 862 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 PDHA1P08559 390 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 C6P13671 934 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 ZFXP17010 805 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 CES1P23141 567 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 POLR2LP62875 67 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 SIM1P81133 766 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 PTPRRQ15256 657 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 RCOR2Q8IZ40 523 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 EXD1Q8NHP7 514 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 CXorf40AQ8TE69 158 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 COQ10AQ96MF6 247 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 SEMA3CQ99985 751 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 HERPUD2Q9BSE4 406 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 LUC7LQ9NQ29 371 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 PCDHA3Q9Y5H8 950 aa16.2■□□□□ 0.18
SCAMP4-205ENST00000452128 hCG_1818297A0A087WSY0 165 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 GRID2IPA4D2P6 1211 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 TOR1BO14657 336 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 FPGTO14772 594 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 APOL1O14791 398 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 JCHAINP01591 159 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 HLA-DQB2P05538 268 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 KRT10P13645 584 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 CTNNA1P35221 906 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 GRK6P43250 576 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 RABIFP47224 123 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 DSC2Q02487 901 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 ZBTB17Q13105 803 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 EIF2B5Q13144 721 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 PRKD1Q15139 912 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 FAM182AQ5T1J6 154 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 ERAP2Q6P179 960 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 RAB44Q7Z6P3 723 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 BBS5Q8N3I7 341 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 RHBDD1Q8TEB9 315 aa16.19■□□□□ 0.18
SCAMP4-205ENST00000452128 SETD7Q8WTS6 366 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms