RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 NLGN3Q9NZ94 848 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 UVRAGQ9P2Y5 699 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 KNTC1P50748 2209 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 ARID1BQ8NFD5 2236 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-208ENST00000451893 MYLKQ15746 1914 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 CYP1A2P05177 515 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 JUNDP17535 347 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 ARL4AP40617 200 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 TARDBPQ13148 414 aaKnown RBP eCLIP21.85■■□□□ 1.09
C9orf3-208ENST00000451893 PROX2Q3B8N5 592 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 RFX8Q6ZV50 586 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 BTN2A2Q8WVV5 523 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 ASB12Q8WXK4 309 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 DCBLD2Q96PD2 775 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 DKK3Q9UBP4 350 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 CLCA2Q9UQC9 943 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 MFHAS1Q9Y4C4 1052 aa21.85■■□□□ 1.09
C9orf3-208ENST00000451893 SPTY2D1-AS1A0A0U1RR47 76 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 TMEM191CA6NGB0 347 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 CSF2P04141 144 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 MIPP30301 263 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 PAPOLAP51003 745 aaKnown RBP21.84■■□□□ 1.09
C9orf3-208ENST00000451893 SUOXP51687 545 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 ZNF135P52742 658 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-208ENST00000451893 FZD2Q14332 565 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 PAPD7Q5XG87 772 aaKnown RBP21.84■■□□□ 1.09
C9orf3-208ENST00000451893 SLC35G2Q8TBE7 412 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 LMX1AQ8TE12 382 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 FNIP1Q8TF40 1166 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 KCTD15Q96SI1 283 aaPredicted RBP21.84■■□□□ 1.09
C9orf3-208ENST00000451893 IL12RB2Q99665 862 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 CPEB1Q9BZB8 566 aaKnown RBP21.84■■□□□ 1.09
C9orf3-208ENST00000451893 THAP2Q9H0W7 228 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 ATP13A3Q9H7F0 1226 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 L2HGDHQ9H9P8 463 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 LHX3Q9UBR4 397 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 LCMT1Q9UIC8 334 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 SALL4Q9UJQ4 1053 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 DOLKQ9UPQ8 538 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 ANKRD36A6QL64 1941 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 ACACAQ13085 2346 aa21.84■■□□□ 1.09
C9orf3-208ENST00000451893 H3BRJ5 948 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 J3KR12 359 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SCAMP1O15126 338 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 INSIG1O15503 277 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 LZTS3O60299 673 aaPredicted RBP21.83■■□□□ 1.09
C9orf3-208ENST00000451893 PRAMEF11O60813 436 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 NEBLO76041 1014 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 NME1P15531 152 aaKnown RBP21.83■■□□□ 1.09
C9orf3-208ENST00000451893 ERCC2P18074 760 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SERPINA4P29622 427 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SEMG2Q02383 582 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 CYTH1Q15438 398 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 CA9Q16790 459 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 FAXCQ5TGI0 409 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 KDM7AQ6ZMT4 941 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 ZNF548Q8NEK5 533 aaPredicted RBP21.83■■□□□ 1.09
C9orf3-208ENST00000451893 TPCN2Q8NHX9 752 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 HNRNPLLQ8WVV9 542 aaKnown RBP21.83■■□□□ 1.09
C9orf3-208ENST00000451893 GLMNQ92990 594 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 APOLD1Q96LR9 279 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SLC13A1Q9BZW2 595 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SLC39A8Q9C0K1 460 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SUV39H2Q9H5I1 410 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 LRRC19Q9H756 370 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 SPASTQ9UBP0 616 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 DKK4Q9UBT3 224 aa21.83■■□□□ 1.09
C9orf3-208ENST00000451893 APOBEC3BQ9UH17 382 aaKnown RBP21.83■■□□□ 1.09
C9orf3-208ENST00000451893 AREL1O15033 823 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 AQP9O43315 295 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 URI1O94763 535 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-208ENST00000451893 TIMP2P16035 220 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 SSR1P43307 286 aaKnown RBP21.82■■□□□ 1.08
C9orf3-208ENST00000451893 CAMK2BQ13554 666 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 BRAT1Q6PJG6 821 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 PSTKQ8IV42 348 aaKnown RBP21.82■■□□□ 1.08
C9orf3-208ENST00000451893 HSPH1Q92598 858 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 ZNF641Q96N77 438 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-208ENST00000451893 TUBGCP5Q96RT8 1024 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 PEBP4Q96S96 227 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 KLF6Q99612 283 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-208ENST00000451893 USP29Q9HBJ7 922 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 NCKIPSDQ9NZQ3 722 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 CTTNBP2NLQ9P2B4 639 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 CAPN6Q9Y6Q1 641 aa21.82■■□□□ 1.08
C9orf3-208ENST00000451893 FAM208BQ5VWN6 2430 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 ADAMTS20P59510 1910 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 K7ESM1 405 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 CKMT1AP12532 417 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 HTR1BP28222 390 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 IGFALSP35858 605 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 YPEL5P62699 121 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 BCL2L1Q07817 233 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 SMTNL2Q2TAL5 461 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 ZCCHC8Q6NZY4 707 aaKnown RBP21.81■■□□□ 1.08
C9orf3-208ENST00000451893 LRRC69Q6ZNQ3 347 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 BBS5Q8N3I7 341 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 HCAR2Q8TDS4 363 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 NSMCE1Q8WV22 266 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 TRIM7Q9C029 511 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms