RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 VPS41P49754 854 aa24.2■■□□□ 1.46
CPSF4-207ENST00000451876 GEMP55040 296 aa24.2■■□□□ 1.46
CPSF4-207ENST00000451876 RPL6Q02878 288 aaKnown RBP24.2■■□□□ 1.46
CPSF4-207ENST00000451876 CCDC15Q0P6D6 951 aa24.2■■□□□ 1.46
CPSF4-207ENST00000451876 ZNF572Q7Z3I7 529 aaPredicted RBP24.2■■□□□ 1.46
CPSF4-207ENST00000451876 ETNK1Q9HBU6 452 aa24.2■■□□□ 1.46
CPSF4-207ENST00000451876 PHTF1Q9UMS5 762 aa24.2■■□□□ 1.46
CPSF4-207ENST00000451876 AAR2Q9Y312 384 aaKnown RBP24.2■■□□□ 1.46
CPSF4-207ENST00000451876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 A0A1W2PQ67 120 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 RIOK3O14730 519 aaKnown RBP24.19■■□□□ 1.46
CPSF4-207ENST00000451876 ECEL1O95672 775 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 KRT14P02533 472 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 CTPS1P17812 591 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 CHRNA4P43681 627 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 PPP2CBP62714 309 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 POLR2LP62875 67 aaKnown RBP24.19■■□□□ 1.46
CPSF4-207ENST00000451876 PPP2CAP67775 309 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 PRPSAP1Q14558 356 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 WHAMMP3Q1A5X7 153 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 KCTD11Q693B1 232 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 TMEFF1Q8IYR6 380 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 GRK7Q8WTQ7 553 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 SLCO2A1Q92959 643 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 IFT43Q96FT9 208 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 FEM1CQ96JP0 617 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 RAB6BQ9NRW1 208 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 PLXNA2O75051 1894 aa24.19■■□□□ 1.46
CPSF4-207ENST00000451876 SDK1Q7Z5N4 2213 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3DA0A087WVF3 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3IA0A087WXS9 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3EA0A087X179 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3KA0A087X1G2 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 A0A0J9YYE9 177 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 A0A0U1RQS6 177 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3FA6NER0 549 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-207ENST00000451876 C10orf142B7Z368 130 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3LB9A6J9 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 MAP3K13O43283 966 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 AP1G1O43747 822 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 NDUFS2O75306 463 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TRBC1P01850 177 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3HP0C7X1 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 MMP12P39900 470 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 PTGIRP43119 386 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 EPHB1P54762 984 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 FAM193AP78312 1265 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3GQ6DHY5 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3CQ6IPX1 549 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 SLC36A4Q6YBV0 504 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 TBC1D3Q8IZP1 549 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-207ENST00000451876 PDCD7Q8N8D1 485 aaKnown RBP24.18■■□□□ 1.46
CPSF4-207ENST00000451876 OR2T34Q8NGX1 318 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 KRT12Q99456 494 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 FICDQ9BVA6 458 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 FSD1LQ9BXM9 530 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 DUSP15Q9H1R2 295 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-207ENST00000451876 KCNH6Q9H252 994 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 KDM4CQ9H3R0 1056 aa24.18■■□□□ 1.46
CPSF4-207ENST00000451876 ARIH1Q9Y4X5 557 aaPredicted RBP24.18■■□□□ 1.46
CPSF4-207ENST00000451876 LOC285095A0A1B0GVY8 99 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 NPIPB15A6NHN6 443 aaPredicted RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 LRRC72A6NJI9 287 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 A8MX80 341 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ANKRD66B4E2M5 251 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 USP12O75317 370 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ATXN1LP0C7T5 689 aaKnown RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ADRA1AP35348 466 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 GRIA4P48058 902 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PTPN5P54829 565 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 CKAP4Q07065 602 aaKnown RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 RALGDSQ12967 914 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 SPARCL1Q14515 664 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 QPCTQ16769 361 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PMS2CLQ68D20 193 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ZC3H14Q6PJT7 736 aaKnown RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 CEP68Q76N32 757 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 SLC41A1Q8IVJ1 513 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 RMDN1Q96DB5 314 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 MCCC1Q96RQ3 725 aaPredicted RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 APOL2Q9BQE5 337 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PREBQ9HCU5 417 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 FAM86C1Q9NVL1 165 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 B4GALT6Q9UBX8 382 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PPIL1Q9Y3C6 166 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PCDH8O95206 1070 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 NDST3O95803 873 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 GAS8O95995 478 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 AGTP01019 485 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 FDFT1P37268 417 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 RPL26P61254 145 aaKnown RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ELP6Q0PNE2 266 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 SEMA5AQ13591 1074 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 SIM2Q14190 667 aaPredicted RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PLK5Q496M5 336 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 SCRN2Q96FV2 425 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 PPP1R2P1Q96PQ5 205 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 WRAP53Q9BUR4 548 aaKnown RBP24.17■■□□□ 1.46
CPSF4-207ENST00000451876 ADGRE3Q9BY15 652 aa24.17■■□□□ 1.46
CPSF4-207ENST00000451876 FEZ2Q9UHY8 353 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms