RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 SLC13A1Q9BZW2 595 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 XPO4Q9C0E2 1151 aaKnown RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 NENFQ9UMX5 172 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 URB1O60287 2271 aaKnown RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 DSPP15924 2871 aaKnown RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 FAM208BQ5VWN6 2430 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 TRABD2BA6NFA1 517 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 INSIG1O15503 277 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 AQP9O43315 295 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 KRT7P08729 469 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 GIMD1P0DJR0 217 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 JUNDP17535 347 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 RPIAP49247 311 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 DAB2P98082 770 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 SLC25A11Q02978 314 aaKnown RBP16.15■□□□□ 0.18
SGCE-208ENST00000450385 DNAJC3Q13217 504 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 CAMK1DQ8IU85 385 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 FSTL5Q8N475 847 aaPredicted RBP16.15■□□□□ 0.18
SGCE-208ENST00000450385 NPWQ8N729 165 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 WDR48Q8TAF3 677 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 ZNF564Q8TBZ8 553 aaPredicted RBP16.15■□□□□ 0.18
SGCE-208ENST00000450385 HSPH1Q92598 858 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
SGCE-208ENST00000450385 ZFHX4Q86UP3 3567 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 LMO7DNF2Z398 122 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 K7ESM1 405 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 TRAFD1O14545 582 aaPredicted RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 HTRA2O43464 458 aaPredicted RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 MAFKO60675 156 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 SDC3O75056 442 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 PIGNO95427 931 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 KRT10P13645 584 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 AMPD1P23109 780 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 MAN1A1P33908 653 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 EIF4A3P38919 411 aaKnown RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 SCNN1BP51168 640 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 MTM1Q13496 603 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 KRT81Q14533 505 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 ZNF235Q14590 738 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 RTP5Q14D33 572 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 MARC1Q5VT66 337 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 VSIG1Q86XK7 387 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 RAVER1Q8IY67 606 aaKnown RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 ATPAF2Q8N5M1 289 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 DCBLD1Q8N8Z6 715 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 ZNF548Q8NEK5 533 aaPredicted RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 SCG3Q8WXD2 468 aaKnown RBP16.14■□□□□ 0.17
SGCE-208ENST00000450385 NXPE2Q96DL1 559 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 EXOC2Q96KP1 924 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 NUDCD1Q96RS6 583 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 IL12RB2Q99665 862 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 ANP32EQ9BTT0 268 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 DEF6Q9H4E7 631 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 UCKL1Q9NWZ5 548 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 GGT7Q9UJ14 662 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 ITM2BQ9Y287 266 aa16.14■□□□□ 0.17
SGCE-208ENST00000450385 PDE2AO00408 941 aaPredicted RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 TNFRSF10CO14798 259 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 LZTS3O60299 673 aaPredicted RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 PROSCO94903 275 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 ALPIP09923 528 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 C6P13671 934 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 CR2P20023 1033 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 KELP23276 732 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 IGFALSP35858 605 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 ARHGAP25P42331 645 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 LIG3P49916 1009 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 PPARDQ03181 441 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 EIF2B5Q13144 721 aaKnown RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 ELOCQ15369 112 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 SMTNL2Q2TAL5 461 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 ASTE1Q2TB18 679 aaPredicted RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 HES3Q5TGS1 186 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 TIGD7Q6NT04 549 aaPredicted RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 NDUFAF2Q8N183 169 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 TEX26Q8N6G2 289 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 APOLD1Q96LR9 279 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 MGME1Q9BQP7 344 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 ZNF670Q9BS34 389 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 WRAP53Q9BUR4 548 aaKnown RBP16.13■□□□□ 0.17
SGCE-208ENST00000450385 SCUBE2Q9NQ36 999 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 PHTF1Q9UMS5 762 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 CLCA2Q9UQC9 943 aa16.13■□□□□ 0.17
SGCE-208ENST00000450385 PKD1L2Q7Z442 2459 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 APC2O95996 2303 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 PSMD11O00231 422 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 TAF4O00268 1085 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 PEX11BO96011 259 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 ELFN1P0C7U0 828 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 MX2P20592 715 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 IL4RP24394 825 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 CCNCP24863 283 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 TRIM23P36406 574 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 ARSEP51690 589 aa16.12■□□□□ 0.17
SGCE-208ENST00000450385 SLC10A7Q0GE19 358 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms