RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CXCR5P32302 372 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 NUDT1P36639 197 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 PAFAH1B1P43034 410 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 CLDN2P57739 230 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 YBEYP58557 167 aaPredicted RBP17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 SNRPD1P62314 119 aaKnown RBP17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 MMRN1Q13201 1228 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 SERINC3Q13530 473 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 CCDC181Q5TID7 509 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 KAZNQ674X7 775 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 PLPP6Q8IY26 295 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 EID2Q8N6I1 236 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 SAP25Q8TEE9 199 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 FAF2Q96CS3 445 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 KLHL32Q96NJ5 620 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 CAAP1Q9H8G2 361 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 FADS3Q9Y5Q0 445 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 FRYQ5TBA9 3013 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 CXorf51AA0A1B0GTR3 108 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ZSCAN5CA6NGD5 496 aaPredicted RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 EFCAB8A8MWE9 144 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 APOL1O14791 398 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 TNFSF14O43557 240 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 POP4O95707 220 aaKnown RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ERCC2P18074 760 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 AMPD1P23109 780 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 EPHA8P29322 1005 aaPredicted RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 SERPINB6P35237 376 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ABL2P42684 1182 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ARRB1P49407 418 aaPredicted RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 RHOAP61586 193 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 FGL2Q14314 439 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 TAZQ16635 292 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ZNF805Q5CZA5 627 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 LRRC73Q5JTD7 316 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 TMCO3Q6UWJ1 677 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 BZW1Q7L1Q6 419 aaKnown RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 IQCHQ86VS3 1027 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 UMODL1-AS1Q8N2C9 162 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 LZTR1Q8N653 840 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 VOPP1Q96AW1 172 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 FEM1CQ96JP0 617 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 EXOC2Q96KP1 924 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ARGLU1Q9NWB6 273 aaPredicted RBP17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 FTSJ1Q9UET6 329 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 GGT7Q9UJ14 662 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 ITM2BQ9Y287 266 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
PRPF40A-204ENST00000450303 J3KR12 359 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 INSIG1O15503 277 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 CST8O60676 142 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 MAGEC1O60732 1142 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 SDC3O75056 442 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 PAK4O96013 591 aaPredicted RBP17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 ITIH2P19823 946 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 HNRNPA2B1P22626 353 aaKnown RBP17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 IL4RP24394 825 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 AKT2P31751 481 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 DPYSQ14117 519 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 CYTH1Q15438 398 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 INAVAQ3KP66 663 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 PARP15Q460N3 678 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 TMEM259Q4ZIN3 620 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 GDPD4Q6W3E5 623 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 MARCH9Q86YJ5 346 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 SLC13A5Q86YT5 568 aaPredicted RBP17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 RASGEF1CQ8N431 466 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 TTC13Q8NBP0 860 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 TMEM145Q8NBT3 493 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 OR13H1Q8NG92 308 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 PCDH19Q8TAB3 1148 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 HEMGNQ9BXL5 484 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 SLC17A9Q9BYT1 436 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 SLC39A8Q9C0K1 460 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 LRRC19Q9H756 370 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 ERVMER34-1Q9H9K5 563 aa17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 TTC7AQ9ULT0 858 aaPredicted RBP17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 KMT2BQ9UMN6 2715 aaPredicted RBP17.22■□□□□ 0.35
PRPF40A-204ENST00000450303 USP24Q9UPU5 2620 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 IGLON5A6NGN9 336 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 PGRMC1O00264 195 aaKnown RBP17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 NEMP1O14524 444 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 RAD51BO15315 384 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 LDOC1O95751 146 aaPredicted RBP17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 IGSF6O95976 241 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 KRT10P13645 584 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 TGM2P21980 687 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 RXRGP48443 463 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 PAPOLAP51003 745 aaKnown RBP17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 RPS21P63220 83 aaKnown RBP17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 OVGP1Q12889 678 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 INO80DQ53TQ3 878 aaPredicted RBP17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 SLC9A4Q6AI14 798 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 AADACL2Q6P093 401 aa17.21■□□□□ 0.35
PRPF40A-204ENST00000450303 GCNT7Q6ZNI0 430 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms