RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 APOLD1Q96LR9 279 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 PSKH2Q96QS6 385 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 IL12RB2Q99665 862 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 SLC13A1Q9BZW2 595 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 ETNK2Q9NVF9 386 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 APOBEC3BQ9UH17 382 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 ZFHX4Q86UP3 3567 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 GOLGA4Q13439 2230 aaKnown RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 ARID1BQ8NFD5 2236 aaPredicted RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 TMEM110-MUSTN1A8MSY1 372 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 MUSKO15146 869 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 H2AFZP0C0S5 128 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 HTR1BP28222 390 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 HNRNPH3P31942 346 aaKnown RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 GJC1P36383 396 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 MMP12P39900 470 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 SEMG2Q02383 582 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 PPARDQ03181 441 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 FAXCQ5TGI0 409 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 ZCCHC8Q6NZY4 707 aaKnown RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 MACC1Q6ZN28 852 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 H2AFVQ71UI9 128 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 ZSWIM9Q86XI8 627 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 PHACTR4Q8IZ21 702 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 FAM181AQ8N9Y4 354 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 OR8K1Q8NGG5 319 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 ECHDC3Q96DC8 303 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 NXPE2Q96DL1 559 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 TSPY26PQ9H489 355 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 USP29Q9HBJ7 922 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 NCKIPSDQ9NZQ3 722 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 RCOR3Q9P2K3 495 aaPredicted RBP15.38■□□□□ 0.05
CHD3-205ENST00000449744 DKK4Q9UBT3 224 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 KLF15Q9UIH9 416 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 CLCA2Q9UQC9 943 aa15.38■□□□□ 0.05
CHD3-205ENST00000449744 AKAP13Q12802 2813 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 CFAP69A5D8W1 941 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 PEX5P50542 639 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 BLKP51451 505 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 INSM1Q01101 510 aaPredicted RBP15.37■□□□□ 0.05
CHD3-205ENST00000449744 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 WSCD2Q2TBF2 565 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 DEFB133Q30KQ1 61 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 PRRT3Q5FWE3 981 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 ZFYVE27Q5T4F4 411 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 MARC1Q5VT66 337 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 RBFAQ8N0V3 343 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 ATL2Q8NHH9 583 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 PDCD6IPQ8WUM4 868 aaKnown RBP15.37■□□□□ 0.05
CHD3-205ENST00000449744 RFFLQ8WZ73 363 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 ABCG4Q9H172 646 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 SCUBE2Q9NQ36 999 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 UVRAGQ9P2Y5 699 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 LCMT1Q9UIC8 334 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 SALL4Q9UJQ4 1053 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 AK5Q9Y6K8 562 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 ATRXP46100 2492 aa15.37■□□□□ 0.05
CHD3-205ENST00000449744 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
CHD3-205ENST00000449744 TRAFD1O14545 582 aaPredicted RBP15.36■□□□□ 0.05
CHD3-205ENST00000449744 TPP1O14773 563 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 AKR1B10O60218 316 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 MAFKO60675 156 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 SOCS5O75159 536 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 MT-CO3P00414 261 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 PCCBP05166 539 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 ANXA6P08133 673 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 ELFN1P0C7U0 828 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 MYF5P13349 255 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 CTSEP14091 401 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 NFKBIAP25963 317 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 MMP13P45452 471 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 ADKP55263 362 aaKnown RBP15.36■□□□□ 0.05
CHD3-205ENST00000449744 MMRN1Q13201 1228 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 C1orf61Q13536 156 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 INPP5AQ14642 412 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 AGERQ15109 404 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 ENPP7Q6UWV6 458 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 DPPA4Q7L190 304 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 LRRC49Q8IUZ0 686 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 MAP7D3Q8IWC1 876 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 CACTIN-AS1Q8N1I8 211 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 KCTD6Q8NC69 237 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 GLMNQ92990 594 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 TBATAQ96M53 351 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 NUDCD1Q96RS6 583 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 APOOQ9BUR5 198 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 TCEAL2Q9H3H9 227 aaPredicted RBP15.36■□□□□ 0.05
CHD3-205ENST00000449744 NENFQ9UMX5 172 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 LHX6Q9UPM6 363 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 DOLKQ9UPQ8 538 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 RAXQ9Y2V3 346 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 ZFYVE26Q68DK2 2539 aa15.36■□□□□ 0.05
CHD3-205ENST00000449744 SSU72P8A0A1W2PR75 194 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 CPED1A4D0V7 1026 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 A8MX80 341 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 RECQL5O94762 991 aaPredicted RBP15.35■□□□□ 0.05
CHD3-205ENST00000449744 PROSCO94903 275 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms