RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 TBC1D3KA0A087X1G2 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3FA6NER0 549 aaPredicted RBP12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3LB9A6J9 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ALOX15BO15296 676 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 FFAR2O15552 330 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ADH1BP00325 375 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 KRT7P08729 469 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3HP0C7X1 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 C5AR1P21730 350 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 DGKAP23743 735 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 SLC8A1P32418 973 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ARL4AP40617 200 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TAS2R40P59535 323 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 OVGP1Q12889 678 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ATP13A4Q4VNC1 1196 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3GQ6DHY5 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3CQ6IPX1 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 C22orf39Q6P5X5 142 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 CLEC18BQ6UXF7 455 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 RAD9BQ6WBX8 426 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 DSG4Q86SJ6 1040 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 IQCHQ86VS3 1027 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TMEM139Q8IV31 216 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ARHGAP12Q8IWW6 846 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3Q8IZP1 549 aaPredicted RBP12.61□□□□□ -0.39
SSR4-205ENST00000447375 LZTR1Q8N653 840 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 SPC24Q8NBT2 197 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 GRAMD1AQ96CP6 724 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 BAG1Q99933 345 aaPredicted RBP12.61□□□□□ -0.39
SSR4-205ENST00000447375 SLC39A8Q9C0K1 460 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
SSR4-205ENST00000447375 UCKL1Q9NWZ5 548 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 ATXN7L1Q9ULK2 861 aaPredicted RBP12.61□□□□□ -0.39
SSR4-205ENST00000447375 RELNP78509 3460 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 TMEM110-MUSTN1A8MSY1 372 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 LATO43561 262 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 BUB1O43683 1085 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 PPFIA2O75334 1257 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 TNFSF15O95150 251 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 IL1BP01584 269 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 AMPD1P23109 780 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 SLC1A1P43005 524 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 CCR10P46092 362 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 ADPRHP54922 357 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 CDH6P55285 790 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 STAT4Q14765 748 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 PDK2Q15119 407 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 LRRC38Q5VT99 294 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 FAM46CQ5VWP2 391 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 CLEC14AQ86T13 490 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 PCDH20Q8N6Y1 951 aaKnown RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 NPWQ8N729 165 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 KCTD6Q8NC69 237 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 TMIEQ8NEW7 156 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 CELF6Q96J87 481 aaKnown RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 SARDHQ9UL12 918 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 REXO2Q9Y3B8 237 aaKnown RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
SSR4-205ENST00000447375 ENTPD2Q9Y5L3 495 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 ACTL7AQ9Y615 435 aa12.6□□□□□ -0.39
SSR4-205ENST00000447375 MYO9AB2RTY4 2548 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 RCCD1A6NED2 376 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 BNIP3LO60238 219 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 PRAMEF11O60813 436 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 IPO7O95373 1038 aaKnown RBP12.59□□□□□ -0.39
SSR4-205ENST00000447375 CD48P09326 243 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 THEGLP0DJG4 465 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 ALPPL2P10696 532 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 TGM2P21980 687 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 CHRNA3P32297 505 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 RECQLP46063 649 aaPredicted RBP12.59□□□□□ -0.39
SSR4-205ENST00000447375 NOP2P46087 812 aaKnown RBP12.59□□□□□ -0.39
SSR4-205ENST00000447375 PSMD8P48556 350 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 PAPOLAP51003 745 aaKnown RBP12.59□□□□□ -0.39
SSR4-205ENST00000447375 PPP2CBP62714 309 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 PPP2CAP67775 309 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 KRT81Q14533 505 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 IGFBP7Q16270 282 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 CARD16Q5EG05 197 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 TMCO3Q6UWJ1 677 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 DPY19L3Q6ZPD9 716 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 MAP7D3Q8IWC1 876 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms