RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 DTWD2Q8NBA8 298 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 OR52K1Q8NGK4 314 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 RMDN1Q96DB5 314 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 PPP1R16AQ96I34 528 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 EIF2B3Q9NR50 452 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 FBXL12Q9NXK8 326 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 EBF1Q9UH73 591 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 V9GYY5 206 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 ERI2A8K979 691 aaKnown RBP18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 UPK3BL1B0FP48 263 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 UPK3BL2E5RIL1 263 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 RNASEH2AO75792 299 aaKnown RBP18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 SUN1O94901 812 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 PIRTP0C851 137 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 ACADMP11310 421 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 DMWDQ09019 674 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 SLC1A5Q15758 541 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 QPCTQ16769 361 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 DENND5AQ6IQ26 1287 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 RANBP10Q6VN20 620 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 PPP1R21Q6ZMI0 780 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 ERN2Q76MJ5 926 aaKnown RBP18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 TTC7BQ86TV6 843 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 FAM124AQ86V42 546 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 OMDQ99983 421 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 EPC1Q9H2F5 836 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 EPB41L5Q9HCM4 733 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 GRHL1Q9NZI5 618 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 ANAPC5Q9UJX4 755 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 ARIH1Q9Y4X5 557 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 SCN8AQ9UQD0 1980 aa18.1■□□□□ 0.49
TRAPPC4-203ENST00000447216 A0A0U1RQS6 177 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 BHMG1C9JSJ3 638 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 LAMTOR5O43504 91 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 ALPIP09923 528 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 TPH1P17752 444 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 XPAP23025 273 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 AVPR2P30518 371 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 TNNT3P45378 269 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 NEK3P51956 506 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 MTM1Q13496 603 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 UGP2Q16851 508 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 TTC31Q49AM3 519 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 PIP5KL1Q5T9C9 394 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 AGBL4Q5VU57 503 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 NAPEPLDQ6IQ20 393 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 HIBCHQ6NVY1 386 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 FBXL19Q6PCT2 694 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 MAMSTRQ6ZN01 415 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 ZNF534Q76KX8 674 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 RASSF3Q86WH2 238 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 HCAR2Q8TDS4 363 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 ADGRE3Q9BY15 652 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 HDAC8Q9BY41 377 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 PRMT8Q9NR22 394 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 PHTF1Q9UMS5 762 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 ITM2BQ9Y287 266 aa18.09■□□□□ 0.49
TRAPPC4-203ENST00000447216 ABCA7Q8IZY2 2146 aa18.08■□□□□ 0.49
TRAPPC4-203ENST00000447216 A8MX80 341 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 TP73O15350 636 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 SPINT1O43278 529 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 EPOP01588 193 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 C7P10643 843 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 ADRB3P13945 408 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 HLA-DPA1P20036 260 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 TPMTP51580 245 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 RPL26P61254 145 aaKnown RBP18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZBTB16Q05516 673 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 PCGF5Q86SE9 256 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 C1orf210Q8IVY1 113 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 CAMKK1Q8N5S9 505 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 RLN3Q8WXF3 142 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 PWWP2AQ96N64 755 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 CASS4Q9NQ75 786 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 WHRNQ9P202 907 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 GGT7Q9UJ14 662 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 SCML1Q9UN30 329 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 CYP8B1Q9UNU6 501 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 RPL26L1Q9UNX3 145 aaKnown RBP18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 SPO11Q9Y5K1 396 aa18.08■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZNF318Q5VUA4 2279 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 A0A0J9YYE9 177 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 A0A1W2PQ67 120 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 ANKRD66B4E2M5 251 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 TRBC1P01850 177 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 FGF1P05230 155 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 HNF1BP35680 557 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 GRIA4P48058 902 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 SESN2P58004 480 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 TAS2R38P59533 333 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 POLR2LP62875 67 aaKnown RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 FAM193AP78312 1265 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 CDK16Q00536 496 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms