RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 BRAT1Q6PJG6 821 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 TPGS1Q6ZTW0 290 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 BRINP3Q76B58 766 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 OR8K5Q8NH50 307 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 GRIN3AQ8TCU5 1115 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 PDCD6IPQ8WUM4 868 aaKnown RBP8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 ROBO4Q8WZ75 1007 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 ATG4CQ96DT6 458 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 APOPT1Q96IL0 206 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 LURAP1Q96LR2 239 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 CHID1Q9BWS9 393 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 MRPL37Q9BZE1 423 aaKnown RBP8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 MTFR1LQ9H019 292 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 OR51M1Q9H341 326 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 CHMP1AQ9HD42 196 aaPredicted RBP8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 DDX4Q9NQI0 724 aaKnown RBP8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 SAR1AQ9NR31 198 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 ACOXLQ9NUZ1 547 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 B3GNT2Q9NY97 397 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 CD274Q9NZQ7 290 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 AUP1Q9Y679 476 aa8.71□□□□□ -1.02
MCF2L2-203ENST00000447025 A0A1B0GV90 55 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 FAM92AA1XBS5 289 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 LOC110117498-PIK3R3F6TDL0 507 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 H3BRB1 525 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 KCNQ3O43525 872 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 RHOBTB1O94844 696 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ARP10275 920 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 PSKH1P11801 424 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 HNRNPLP14866 589 aaKnown RBP eCLIP8.7□□□□□ -1.024e-8■■■■□ 25
MCF2L2-203ENST00000447025 NUP62P37198 522 aaPredicted RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CRKLP46109 303 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 LIG4P49917 911 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ACTR1AP61163 376 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 GRB7Q14451 532 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZNF805Q5CZA5 627 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 TMEM81Q6P7N7 255 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP49Q70CQ1 688 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CAMKMTQ7Z624 323 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ULK2Q8IYT8 1036 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 KDM1BQ8NB78 822 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CPNE4Q96A23 557 aaPredicted RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 FCRL4Q96PJ5 515 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 FAM111AQ96PZ2 611 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CYTH2Q99418 400 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 AGAP2Q99490 1192 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CDC6Q99741 560 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 METTL22Q9BUU2 404 aaPredicted RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 SARGQ9BW04 601 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 GPR52Q9Y2T5 361 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 DHRS7Q9Y394 339 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ROBO2Q9HCK4 1378 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 KIAA1217Q5T5P2 1943 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 A0A0U1RQV5 110 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L15C9J2P7 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L12C9JPN9 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L11C9JVI0 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L21D6R901 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L18D6R9N7 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L22D6RA61 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L19D6RCP7 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L20D6RJB6 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 H3BMM5 538 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 VEGFDO43915 354 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 SORBS3O60504 671 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 KRT37O76014 449 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 SCAF4O95104 1147 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 MFN2O95140 757 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 NSA2O95478 260 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 PTBP3O95758 552 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 IGHV2-70P01814 119 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 GALP22466 123 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 DNM2P50570 870 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ERVFC1P60507 584 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZNF91Q05481 1191 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 PPATQ06203 517 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 USP17L24Q0WX57 530 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 UAP1Q16222 522 aaPredicted RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 LRRC24Q50LG9 513 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 FAM98BQ52LJ0 330 aaKnown RBP8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 RUNDC3AQ59EK9 446 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZPBP2Q6X784 338 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 CFAP77Q6ZQR2 320 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ZNF767PQ75MW2 155 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 DPPA2Q7Z7J5 298 aa8.7□□□□□ -1.02
MCF2L2-203ENST00000447025 ARMC8Q8IUR7 673 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms