RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SPINK2P20155 84 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 CCNCP24863 283 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 CDC25BP30305 580 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 PFN3P60673 137 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 ERAP2Q6P179 960 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 MFSD7Q6UXD7 560 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 NPNTQ6UXI9 565 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 SPC24Q8NBT2 197 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 ACRBPQ8NEB7 543 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 HDAC11Q96DB2 347 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 TOR4AQ9NXH8 423 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 APOL1O14791 398 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 SOCS5O75159 536 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 ATXN1LP0C7T5 689 aaKnown RBP18.9■□□□□ 0.62
HDAC4-203ENST00000445704 MARCKSL1P49006 195 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 LIG3P49916 1009 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 SHC2P98077 582 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 FZD2Q14332 565 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 IHHQ14623 411 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 FAM182AQ5T1J6 154 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 TIGD7Q6NT04 549 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-203ENST00000445704 SLCO6A1Q86UG4 719 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 RFX6Q8HWS3 928 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 PAF1Q8N7H5 531 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 PNPLA1Q8N8W4 532 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 FAM174AQ8TBP5 190 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 SPOCK2Q92563 424 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 FATE1Q969F0 183 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 LGMNQ99538 433 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 SEMA3CQ99985 751 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 DDX56Q9NY93 547 aaKnown RBP18.9■□□□□ 0.62
HDAC4-203ENST00000445704 ANGPTL2Q9UKU9 493 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 HEY1Q9Y5J3 304 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 DUSP10Q9Y6W6 482 aa18.9■□□□□ 0.62
HDAC4-203ENST00000445704 COL5A1P20908 1838 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 PSTPIP1O43586 416 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 HYAL3O43820 417 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 CPP00450 1065 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 HLA-DQB2P05538 268 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 GM2AP17900 193 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 MX2P20592 715 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 RABIFP47224 123 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 DYNLT1P63172 113 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 DSC2Q02487 901 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 PDE1CQ14123 709 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 IRF4Q15306 451 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 WSCD2Q2TBF2 565 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 INAVAQ3KP66 663 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 ZNF542PQ5EBM4 170 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 ALG1LQ6GMV1 187 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 C11orf63Q6NUN7 778 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 DPPA4Q7L190 304 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 EID2Q8N6I1 236 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 CCNYQ8ND76 341 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 TPCN2Q8NHX9 752 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 PDCD6IPQ8WUM4 868 aaKnown RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 CDC6Q99741 560 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 BAG1Q99933 345 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 LACRTQ9GZZ8 138 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 LUC7LQ9NQ29 371 aaKnown RBP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 RBM22Q9NW64 420 aaKnown RBP eCLIP18.89■□□□□ 0.61
HDAC4-203ENST00000445704 UCKL1Q9NWZ5 548 aa18.89■□□□□ 0.61
HDAC4-203ENST00000445704 SPTY2D1-AS1A0A0U1RR47 76 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 A8MX80 341 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 CCNB1P14635 433 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 CDKN2BP42772 138 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 PPIDQ08752 370 aaKnown RBP18.88■□□□□ 0.61
HDAC4-203ENST00000445704 ITKQ08881 620 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 PTPRRQ15256 657 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 LLGL1Q15334 1064 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 TAZQ16635 292 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 LIPIQ6XZB0 460 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 DCP2Q8IU60 420 aaKnown RBP18.88■□□□□ 0.61
HDAC4-203ENST00000445704 SLC25A45Q8N413 288 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 CHCHD4Q8N4Q1 142 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 ARRDC2Q8TBH0 407 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 KRT35Q92764 455 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 OLFM3Q96PB7 478 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 C1QTNF7Q9BXJ2 289 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 POLR1EQ9GZS1 481 aaKnown RBP18.88■□□□□ 0.61
HDAC4-203ENST00000445704 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 B4GALT6Q9UBX8 382 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 FTSJ1Q9UET6 329 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 TTLL3Q9Y4R7 772 aa18.88■□□□□ 0.61
HDAC4-203ENST00000445704 GOLGA8CPA6NN73 597 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 KCNK1O00180 336 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 TNFSF14O43557 240 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 PIAS2O75928 621 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 PGLSO95336 258 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 PDHA1P08559 390 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 KRT10P13645 584 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 DGKAP23743 735 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 POLR2LP62875 67 aaKnown RBP18.87■□□□□ 0.61
HDAC4-203ENST00000445704 NIPAL4Q0D2K0 466 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 ZBTB17Q13105 803 aa18.87■□□□□ 0.61
HDAC4-203ENST00000445704 LRRC14Q15048 493 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms