RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 FEM1AQ9BSK4 669 aa18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 TDRD1Q9BXT4 1180 aaKnown RBP18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 C20orf27Q9GZN8 174 aa18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 FBXO6Q9NRD1 293 aaPredicted RBP18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 SH3BP1Q9Y3L3 701 aa18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 OR51B4Q9Y5P0 310 aa18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 ACTL7AQ9Y615 435 aa18.97■□□□□ 0.63
SEMA3D-202ENST00000444867 HGSO14964 777 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 TRIM13O60858 407 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 RASSF9O75901 435 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 TMCC1O94876 653 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 FGF19O95750 216 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 SAT1P21673 171 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 PSMA3P25788 255 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 RASSF2P50749 326 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 TAS2R39P59534 338 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ZBTB16Q05516 673 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 MPP7Q5T2T1 576 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ASRGL1Q7L266 308 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 MFSD6LQ8IWD5 586 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 HS6ST3Q8IZP7 471 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 GPATCH11Q8N954 259 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 RUVBL2Q9Y230 463 aaKnown RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ALPK3Q96L96 1907 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 KLHL2O95198 593 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 GLP2RO95838 553 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 GLUD1P00367 558 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 OGNP20774 298 aaKnown RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 GMPRP36959 345 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ARSDP51689 593 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ZXDBP98169 803 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 CDH18Q13634 790 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ITGA9Q13797 1035 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 TTC31Q49AM3 519 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 MRNIPQ6NTE8 343 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 CNSTQ6PJW8 725 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 PTAR1Q7Z6K3 402 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 CEP97Q8IW35 865 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 CENPLQ8N0S6 344 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 MAB21L3Q8N8X9 362 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 KCTD4Q8WVF5 259 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 INPP5DQ92835 1189 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 OMDQ99983 421 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 TCF25Q9BQ70 676 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ADGRE3Q9BY15 652 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ZNF395Q9H8N7 513 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ASAH2Q9NR71 780 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ARHGEF3Q9NR81 526 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 NLE1Q9NVX2 485 aaPredicted RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 OXSMQ9NWU1 459 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 DNMT3BQ9UBC3 853 aaKnown RBP18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 VPS28Q9UK41 221 aa18.96■□□□□ 0.63
SEMA3D-202ENST00000444867 ITM2AO43736 263 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 CD160O95971 181 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 S1PR4O95977 384 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 NQO1P15559 274 aaKnown RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 MZF1P28698 734 aaPredicted RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 SERPINB3P29508 390 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 AVPR1AP37288 418 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 ASPHQ12797 758 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TAF1AQ15573 450 aaPredicted RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 MPPE1Q53F39 396 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 FSCBQ5H9T9 825 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TMEM240Q5SV17 173 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 LRRC8EQ6NSJ5 796 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 NCEH1Q6PIU2 408 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TBC1D1Q86TI0 1168 aaPredicted RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TDRD5Q8NAT2 981 aaKnown RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TTC8Q8TAM2 541 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 PHOSPHO2Q8TCD6 241 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 BADQ92934 168 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 RMDN1Q96DB5 314 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 ALG14Q96F25 216 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 DNAJC1Q96KC8 554 aaKnown RBP18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 SCYL1Q96KG9 808 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 TBATAQ96M53 351 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 CFAP97Q9P2B7 532 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 LHX3Q9UBR4 397 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 DNAJC16Q9Y2G8 782 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 RWDD3Q9Y3V2 267 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 KCTD3Q9Y597 815 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 RAI2Q9Y5P3 530 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 ARL5AQ9Y689 179 aa18.95■□□□□ 0.62
SEMA3D-202ENST00000444867 SNAP91O60641 907 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 DDX6P26196 483 aaKnown RBP eCLIP18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 BMPR1AP36894 532 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC26A3P40879 764 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 CSKP41240 450 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 NUMBP49757 651 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 AQP5P55064 265 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 KRT72Q14CN4 511 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 PPM1LQ5SGD2 360 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 LIPMQ5VYY2 423 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 FAM45BPQ6NSW5 357 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 METTL3Q86U44 580 aaKnown RBP18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 MFN1Q8IWA4 741 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 TMEM151AQ8N4L1 468 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 FAM45AQ8TCE6 357 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 USP13Q92995 863 aaPredicted RBP18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 EXOC2Q96KP1 924 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms