RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 FZD4Q9ULV1 537 aa15.89■□□□□ 0.13
USP40-206ENST00000443711 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
USP40-206ENST00000443711 CCDC163A0A0D9SF12 145 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 UPK3BL1B0FP48 263 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 ANKRD66B4E2M5 251 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 UPK3BL2E5RIL1 263 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 PLK4O00444 970 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 AXIN1O15169 862 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 SLC7A4O43246 635 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 ZNF217O75362 1048 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 HEXIM1O94992 359 aaKnown RBP15.88■□□□□ 0.13
USP40-206ENST00000443711 ADRB3P13945 408 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 HLA-DPA1P20036 260 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 P2RY2P41231 377 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 GRIA4P48058 902 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 TPMTP51580 245 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 TERF1P54274 439 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 SARNPP82979 210 aaKnown RBP15.88■□□□□ 0.13
USP40-206ENST00000443711 CSTF1Q05048 431 aaKnown RBP15.88■□□□□ 0.13
USP40-206ENST00000443711 KCNJ11Q14654 390 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 DUPD1Q68J44 220 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 PPP1R21Q6ZMI0 780 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 ZSWIM9Q86XI8 627 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 NEUROG2Q9H2A3 272 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 ARNT2Q9HBZ2 717 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 USP36Q9P275 1121 aaKnown RBP15.88■□□□□ 0.13
USP40-206ENST00000443711 FBXO4Q9UKT5 387 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 SNX24Q9Y343 169 aa15.88■□□□□ 0.13
USP40-206ENST00000443711 SMAPO00193 183 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 AP3B1O00203 1094 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 IGLV3-19P01714 112 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 FGF1P05230 155 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 ITIH2P19823 946 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 OXTRP30559 389 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 RPL21P46778 160 aaKnown RBP15.87■□□□□ 0.13
USP40-206ENST00000443711 PXNP49023 591 aaPredicted RBP15.87■□□□□ 0.13
USP40-206ENST00000443711 NUBP1P53384 320 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 DRG2P55039 364 aaKnown RBP15.87■□□□□ 0.13
USP40-206ENST00000443711 SLC7A5Q01650 507 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 ELP6Q0PNE2 266 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 CALCOCO2Q13137 446 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 GALNT3Q14435 633 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SLC1A5Q15758 541 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 QPCTQ16769 361 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SIRPB2Q5JXA9 342 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 PIP5KL1Q5T9C9 394 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 RNASEH2BQ5TBB1 312 aaKnown RBP15.87■□□□□ 0.13
USP40-206ENST00000443711 ERAP2Q6P179 960 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 USP45Q70EL2 814 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 HOOK3Q86VS8 718 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SLC25A41Q8N5S1 370 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 LRRN4CLQ8ND94 238 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 MCUQ8NE86 351 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 FAM131CQ96AQ9 280 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SCRN2Q96FV2 425 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SRPK1Q96SB4 655 aaKnown RBP15.87■□□□□ 0.13
USP40-206ENST00000443711 APOL2Q9BQE5 337 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 TPSD1Q9BZJ3 242 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 DPH5Q9H2P9 285 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 WHRNQ9P202 907 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 SERGEFQ9UGK8 458 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 ANAPC5Q9UJX4 755 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 VCANP13611 3396 aa15.87■□□□□ 0.13
USP40-206ENST00000443711 KMT2EQ8IZD2 1858 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 A0A0J9YYE9 177 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 TCRBV7S3A2A0A539 114 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 RIOK3O14730 519 aaKnown RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 AP1G1O43747 822 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 USP12O75317 370 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 SEC31AO94979 1220 aaKnown RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 TRBC1P01850 177 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 ATXN1LP0C7T5 689 aaKnown RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 CYP2A6P11509 494 aaPredicted RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 TDGF1P13385 188 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 CTPS1P17812 591 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 ABL2P42684 1182 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 CHRNA4P43681 627 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 FAM193AP78312 1265 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 GUCY2DQ02846 1103 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 CDH17Q12864 832 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 OLIG2Q13516 323 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 MORF4L2Q15014 288 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 AGBL4Q5VU57 503 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 ANKRD22Q5VYY1 191 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 DENND5AQ6IQ26 1287 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 TSSK4Q6SA08 328 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 FAM124AQ86V42 546 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 MAML2Q8IZL2 1156 aaPredicted RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 NAT8LQ8N9F0 302 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 DNAAF3Q8N9W5 541 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 OR52K1Q8NGK4 314 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 FAM126AQ9BYI3 521 aaPredicted RBP15.86■□□□□ 0.13
USP40-206ENST00000443711 SGK2Q9HBY8 427 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 PCDH12Q9NPG4 1184 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 CYP8B1Q9UNU6 501 aa15.86■□□□□ 0.13
USP40-206ENST00000443711 NUMA1Q14980 2115 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 CAPN8A6NHC0 703 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 NEMP1O14524 444 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 AREL1O15033 823 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms