RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 HSPA14Q0VDF9 509 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 PRKD1Q15139 912 aaPredicted RBP10.66□□□□□ -0.7
CALD1-210ENST00000443197 ZNF461Q8TAF7 563 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 ZSCAN18Q8TBC5 510 aaPredicted RBP10.66□□□□□ -0.7
CALD1-210ENST00000443197 NAT14Q8WUY8 206 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 ESAMQ96AP7 390 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 FCRL3Q96P31 734 aaPredicted RBP10.66□□□□□ -0.7
CALD1-210ENST00000443197 ACOX2Q99424 681 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 TCF25Q9BQ70 676 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 EBF4Q9BQW3 602 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 SLC4A7Q9Y6M7 1214 aa10.66□□□□□ -0.7
CALD1-210ENST00000443197 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 UBDO15205 165 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 THRAP10827 490 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 NDST2P52849 883 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 PRMT2P55345 433 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 GSCP56915 257 aaPredicted RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 KPNB1Q14974 876 aaKnown RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 MARK2Q7KZI7 788 aaKnown RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 MYO1HQ8N1T3 1032 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 FSTL5Q8N475 847 aaPredicted RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 ICA1LQ8NDH6 482 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 SH3KBP1Q96B97 665 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 EIF2B3Q9NR50 452 aaKnown RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 GGA2Q9UJY4 613 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 M0QZQ0 153 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 NBNO60934 754 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 AHSGP02765 367 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 SERPINA4P29622 427 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 PKNOX1P55347 436 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 PEX6Q13608 980 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 ARL13AQ5H913 290 aaPredicted RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 HECTD2Q5U5R9 776 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 ARCQ7LC44 396 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 GBP5Q96PP8 586 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 GATA5Q9BWX5 397 aaPredicted RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 OSBPL1AQ9BXW6 950 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 COG4Q9H9E3 785 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 ANKRD6Q9Y2G4 727 aa10.65□□□□□ -0.7
CALD1-210ENST00000443197 GREB1LQ9C091 1923 aaPredicted RBP10.65□□□□□ -0.7
CALD1-210ENST00000443197 E7ESA3 106 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 NR5A2O00482 541 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 LZTS3O60299 673 aaPredicted RBP10.65□□□□□ -0.71
CALD1-210ENST00000443197 FYNP06241 537 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 ZNF7P17097 686 aaPredicted RBP10.65□□□□□ -0.71
CALD1-210ENST00000443197 CLCN5P51795 746 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 CBX2Q14781 532 aaPredicted RBP10.65□□□□□ -0.71
CALD1-210ENST00000443197 MAPRE2Q15555 327 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 TSTD2Q5T7W7 516 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 UGT3A1Q6NUS8 523 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 FAM171BQ6P995 826 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 RTN4RL1Q86UN2 441 aaPredicted RBP10.65□□□□□ -0.71
CALD1-210ENST00000443197 GALNT4Q8N4A0 578 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 IGSF21Q96ID5 467 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 CLIC5Q9NZA1 410 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 PKD2L2Q9NZM6 624 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 HBS1LQ9Y450 684 aaKnown RBP10.65□□□□□ -0.71
CALD1-210ENST00000443197 ACTL7AQ9Y615 435 aa10.65□□□□□ -0.71
CALD1-210ENST00000443197 ITM2AO43736 263 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 NDST3O95803 873 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 GOT2P00505 430 aaKnown RBP10.64□□□□□ -0.71
CALD1-210ENST00000443197 ATP5F1P24539 256 aaPredicted RBP10.64□□□□□ -0.71
CALD1-210ENST00000443197 CDH4P55283 916 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 IL10RBQ08334 325 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
CALD1-210ENST00000443197 FLOT2Q14254 428 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 TEDDM1Q5T9Z0 273 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 LCA5Q86VQ0 697 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 ZNF781Q8N8C0 355 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 AGAP11Q8TF27 550 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 EFCAB1Q9HAE3 211 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 BAG5Q9UL15 447 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 BIRC5O15392 142 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 TYROBPO43914 113 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 OAZ2O95190 189 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 IL2P60568 153 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 ADGRF1Q5T601 910 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 LIPMQ5VYY2 423 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 ANKS6Q68DC2 871 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 SZRD1Q7Z422 152 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 CAMK1DQ8IU85 385 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 PCDH20Q8N6Y1 951 aaKnown RBP10.64□□□□□ -0.71
CALD1-210ENST00000443197 CNTD1Q8N815 330 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
CALD1-210ENST00000443197 SNX19Q92543 992 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 CLPTM1LQ96KA5 538 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 MAGEH1Q9H213 219 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 CASS4Q9NQ75 786 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 BTRCQ9Y297 605 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 RNF103-CHMP3A0A140T963 221 aa10.64□□□□□ -0.71
CALD1-210ENST00000443197 C2orf78A6NCI8 922 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms