RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TDRD1Q9BXT4 1180 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 GPR63Q9BZJ6 419 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CEP44Q9C0F1 390 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SFXN1Q9H9B4 322 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ABCB8Q9NUT2 735 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 INTS10Q9NVR2 710 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 CHKBQ9Y259 395 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SLC30A1Q9Y6M5 507 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 NUP205Q92621 2012 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 LCHNA4D1U4 455 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SNAP91O60641 907 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 GSRP00390 522 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ASLP04424 464 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 C2P06681 752 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PYGLP06737 847 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 RBP1P09455 135 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 LINC00271P0C7V0 271 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CR2P20023 1033 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 BGNP21810 368 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 ETV4P43268 484 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MAGEA12P43365 314 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ARFIP2P53365 341 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 USP4Q13107 963 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PDE1CQ14123 709 aaPredicted RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 GALNT3Q14435 633 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 TRPM8Q7Z2W7 1104 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 STK40Q8N2I9 435 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PCDH20Q8N6Y1 951 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 TUBGCP5Q96RT8 1024 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 AGAP2Q99490 1192 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 WWP1Q9H0M0 922 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 TXLNGQ9NUQ3 528 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 THAP1Q9NVV9 213 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 LHX3Q9UBR4 397 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PSAT1Q9Y617 370 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 COMMD10Q9Y6G5 202 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MROH6A6NGR9 719 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 TMEM114B3SHH9 223 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 GFRA2O00451 464 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 HNRNPCL1O60812 293 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 ZMPSTE24O75844 475 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ADH1CP00326 375 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 PROCP04070 461 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 PABPC1P11940 636 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 EPCAMP16422 314 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 GJA1P17302 382 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 POLR2EP19388 210 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 SLC26A3P40879 764 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SLC1A2P43004 574 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SGSHP51688 502 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ACVR1Q04771 509 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 LMAN2Q12907 356 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SMAD1Q15797 465 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CFAP157Q5JU67 520 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 LYPLAL1Q5VWZ2 237 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SH2D5Q6ZV89 423 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 PTAR1Q7Z6K3 402 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 RAB44Q7Z6P3 723 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 GPR150Q8NGU9 434 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 OR4L1Q8NH43 312 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ADAMTS19Q8TE59 1207 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 WBP2Q969T9 261 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ISG20Q96AZ6 181 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 C19orf43Q9BQ61 176 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 NMRAL1Q9HBL8 299 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SYTL2Q9HCH5 934 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 NLE1Q9NVX2 485 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 DNMT3BQ9UBC3 853 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 CD3EAPO15446 510 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 NFATC1O95644 943 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ALDOAP04075 364 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 RALBP11234 206 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 EZRP15311 586 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 WEE1P30291 646 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 LEPRP48357 1165 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 ARCN1P48444 511 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 RASSF2P50749 326 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 HK2P52789 917 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 PTPN5P54829 565 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ST8SIA6P61647 398 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 IRX4P78413 519 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ARF5P84085 180 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 FOXR1Q6PIV2 292 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 LINGO4Q6UY18 593 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SLC41A1Q8IVJ1 513 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 IRF7Q92985 503 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 DNAJC1Q96KC8 554 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 EXOC2Q96KP1 924 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 STN1Q9H668 368 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 POPDC3Q9HBV1 291 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 RAD18Q9NS91 495 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SLC2A6Q9UGQ3 507 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 DOCK4Q8N1I0 1966 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 CCDC195A0A1B0GUA6 201 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms