RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 LHX3Q9UBR4 397 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 VPS51Q9UID3 782 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 DCTN4Q9UJW0 460 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
CPSF4-206ENST00000441580 DNAH12Q6ZR08 3092 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 MTCL1Q9Y4B5 1905 aaKnown RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 PHGDHO43175 533 aaKnown RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 HAUS5O94927 633 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 UNC5CO95185 931 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 GLP2RO95838 553 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 GSRP00390 522 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 RALBP11234 206 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 MYL4P12829 197 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 GLDCP23378 1020 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 PSMA3P25788 255 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 GABRB3P28472 473 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 SLC26A3P40879 764 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 CSKP41240 450 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 SLC1A6P48664 564 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 SCNN1BP51168 640 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 RHOAP61586 193 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 IRF9Q00978 393 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 CTBP1Q13363 440 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 IHHQ14623 411 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 CYTH1Q15438 398 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 DLG2Q15700 870 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 TBCCQ15814 346 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 KLC3Q6P597 504 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 GLT6D1Q7Z4J2 308 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 MAB21L3Q8N8X9 362 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 OR6P1Q8NGX9 317 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 DNAJC1Q96KC8 554 aaKnown RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 FEM1AQ9BSK4 669 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 C1QTNF1Q9BXJ1 281 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 POPDC3Q9HBV1 291 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 FBXO6Q9NRD1 293 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 CATSPERZQ9NTU4 200 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 INTS10Q9NVR2 710 aaKnown RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 NLE1Q9NVX2 485 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-206ENST00000441580 OR51B4Q9Y5P0 310 aa13.24□□□□□ -0.29
CPSF4-206ENST00000441580 CENPFP49454 3210 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 A0A1W2PRU2 124 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 PFDN6O15212 129 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 TRIM13O60858 407 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 XYLBO75191 536 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 KLHL2O95198 593 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 SPATA31D3P0C874 917 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 KCNA4P22459 653 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RGRP47804 291 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 GRIA4P48058 902 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RASSF2P50749 326 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 CLCN4P51793 760 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 ABCE1P61221 599 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RPL26P61254 145 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 ZBTB16Q05516 673 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 TYSND1Q2T9J0 566 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 NCEH1Q6PIU2 408 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 ZCCHC23Q6ZST2 131 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 SPATA31D4Q6ZUB0 917 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 CLNKQ7Z7G1 428 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 CENPLQ8N0S6 344 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 PLD6Q8N2A8 252 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 LPCAT1Q8NF37 534 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 PIWIL2Q8TC59 973 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 DDI1Q8WTU0 396 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 INPP5DQ92835 1189 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 HDAC10Q969S8 669 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RMDN1Q96DB5 314 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 MYO19Q96H55 970 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 SCYL1Q96KG9 808 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 EXOC2Q96KP1 924 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 CYP2S1Q96SQ9 504 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 LRMDAQ9H2I8 198 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 MRPL46Q9H2W6 279 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 DPP7Q9UHL4 492 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RPL26L1Q9UNX3 145 aaKnown RBP13.23□□□□□ -0.29
CPSF4-206ENST00000441580 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 PCNTO95613 3336 aa13.23□□□□□ -0.29
CPSF4-206ENST00000441580 TTC24A2A3L6 582 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 C5orf67F2Z3F1 127 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 G3V2L1 256 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 LEFTY2O00292 366 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 CCL16O15467 120 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms