RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 MCUQ8NE86 351 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 SHCBP1Q8NEM2 672 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 OR6J1Q8NGC5 347 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 NPLOC4Q8TAT6 608 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 ZFP90Q8TF47 636 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 LHPPQ9H008 270 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 GDAP2Q9NXN4 497 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 GRAP2O75791 330 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 ATP6V1B2P21281 511 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 ELK4P28324 431 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 MAGEA3P43357 314 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 CCT8P50990 548 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 GTF2A2P52657 109 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 C6orf10Q5SRN2 563 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 ATP6V0D2Q8N8Y2 350 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 PDPRQ8NCN5 879 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 RAB2BQ8WUD1 216 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 SEPT8Q92599 483 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 MARCH7Q9H992 704 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 EI24O14681 340 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
PMS1-213ENST00000441310 CELF2O95319 508 aaKnown RBP16.89■□□□□ 0.29
PMS1-213ENST00000441310 ENDOUP21128 410 aaKnown RBP16.89■□□□□ 0.29
PMS1-213ENST00000441310 GRIA4P48058 902 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 PGGT1BP53609 377 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 NAGLUP54802 743 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 PDK2Q15119 407 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 SCYL2Q6P3W7 929 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 DHRSXQ8N5I4 330 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 C12orf29Q8N999 325 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 HPDLQ96IR7 371 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 FEM1CQ96JP0 617 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 SPATA17Q96L03 361 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 MTMR10Q9NXD2 777 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 CCDC167Q9P0B6 97 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 MGAT1P26572 445 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 TUFMP49411 452 aaKnown RBP16.89■□□□□ 0.29
PMS1-213ENST00000441310 AQP6Q13520 282 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 USP33Q8TEY7 942 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 HTRA1Q92743 480 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 KIF12Q96FN5 646 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 ZNF486Q96H40 463 aaPredicted RBP16.89■□□□□ 0.29
PMS1-213ENST00000441310 RNF157Q96PX1 679 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 ATP13A3Q9H7F0 1226 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 TBC1D14Q9P2M4 693 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 A0A096LPK6 155 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 TK2O00142 265 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 BMPR1AP36894 532 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 AKAP14Q86UN6 197 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 LPIN3Q9BQK8 851 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 HOXD1Q9GZZ0 328 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 PRELID1Q9Y255 219 aa16.89■□□□□ 0.29
PMS1-213ENST00000441310 M0QYV0 167 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 PPEF2O14830 753 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 TRIM24O15164 1050 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SAT1P21673 171 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SERPINB1P30740 379 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 TMEM132DQ14C87 1099 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 ELMOD1Q8N336 334 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SLC4A11Q8NBS3 891 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 MAGEE2Q8TD90 523 aaPredicted RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 OSMRQ99650 979 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 SPAG4Q9NPE6 437 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 MRPL40Q9NQ50 206 aaKnown RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 TLL2Q9Y6L7 1015 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 GARSP41250 739 aaKnown RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 GLRBP48167 497 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 RGS7P49802 495 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 HLCSP50747 726 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SLC7A2P52569 658 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 GRM1Q13255 1194 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 C15orf59Q2T9L4 293 aaPredicted RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 AGKQ53H12 422 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 REP15Q6BDI9 236 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 PLEKHG7Q6ZR37 379 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 ZCCHC7Q8N3Z6 543 aaKnown RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 OR7G1Q8NGA0 311 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 OR2T34Q8NGX1 318 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 OR2T3Q8NH03 318 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SGCDQ92629 289 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 MAELQ96JY0 434 aaKnown RBP16.88■□□□□ 0.29
PMS1-213ENST00000441310 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 DGCR6LQ9BY27 220 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 KATNBL1Q9H079 304 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 NMRAL1Q9HBL8 299 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 CACNA2D2Q9NY47 1150 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 EGFL7Q9UHF1 273 aa16.88■□□□□ 0.29
PMS1-213ENST00000441310 SLC22A2O15244 555 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 TSPAN1O60635 241 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 CRTC3Q6UUV7 619 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms