RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SLC1A1P43005 524 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 PFN3P60673 137 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 SLC10A2Q12908 348 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 RALGDSQ12967 914 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 FZD2Q14332 565 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 TCEAL1Q15170 157 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 IRF4Q15306 451 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 IFI16Q16666 785 aaKnown RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 ODF2Q5BJF6 829 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 TPRG1LQ5T0D9 272 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 RHOT1Q8IXI2 618 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 CCDC170Q8IYT3 715 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 TP53I13Q8NBR0 393 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
LTBR-202ENST00000440421 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 TOR4AQ9NXH8 423 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 TTLL3Q9Y4R7 772 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 HEY1Q9Y5J3 304 aa13.83□□□□□ -0.2
LTBR-202ENST00000440421 LRRK1Q38SD2 2015 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 SPTY2D1-AS1A0A0U1RR47 76 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 ENC1O14682 589 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 MATN3O15232 486 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 FFAR2O15552 330 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 NEBLO76041 1014 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 DGKAP23743 735 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 CCNCP24863 283 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 THOP1P52888 689 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 POLR2LP62875 67 aaKnown RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 DYNLT1P63172 113 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 TRAF2Q12933 501 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 DNAJC3Q13217 504 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 LRRC14Q15048 493 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 LRRC38Q5VT99 294 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 TIGD7Q6NT04 549 aaPredicted RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 RAB44Q7Z6P3 723 aaPredicted RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 PARGQ86W56 976 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 RFX6Q8HWS3 928 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 SLC25A45Q8N413 288 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 TEX26Q8N6G2 289 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 CCNYQ8ND76 341 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 ADAMTS14Q8WXS8 1223 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 SEMA3CQ99985 751 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 MAK16Q9BXY0 300 aaKnown RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 LUC7LQ9NQ29 371 aaKnown RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 RBM22Q9NW64 420 aaKnown RBP eCLIP13.82□□□□□ -0.21e-9■□□□□ 9.3
LTBR-202ENST00000440421 DTLQ9NZJ0 730 aa13.82□□□□□ -0.2
LTBR-202ENST00000440421 EPN1Q9Y6I3 576 aaPredicted RBP13.82□□□□□ -0.2
LTBR-202ENST00000440421 APOL1O14791 398 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 HTRA2O43464 458 aaPredicted RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 SOCS5O75159 536 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 PIAS2O75928 621 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 NDUFA10O95299 355 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 CPP00450 1065 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 PCCBP05166 539 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 ELFN1P0C7U0 828 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 CCNB1P14635 433 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 MX2P20592 715 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 DSC2Q02487 901 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 WSCD2Q2TBF2 565 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 TMTC1Q8IUR5 882 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 PLD5Q8N7P1 536 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 MAML1Q92585 1016 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 TSGA13Q96PP4 275 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 LGMNQ99538 433 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 POLR1EQ9GZS1 481 aaKnown RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 DDX56Q9NY93 547 aaKnown RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 ALG6Q9Y672 507 aa13.81□□□□□ -0.2
LTBR-202ENST00000440421 TDRD6O60522 2096 aaKnown RBP13.81□□□□□ -0.2
LTBR-202ENST00000440421 COL5A1P20908 1838 aaPredicted RBP13.8□□□□□ -0.2
LTBR-202ENST00000440421 RCCD1A6NED2 376 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 KCNK1O00180 336 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 TRIM38O00635 465 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 SIGLEC6O43699 453 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 RECQL5O94762 991 aaPredicted RBP13.8□□□□□ -0.2
LTBR-202ENST00000440421 PGLSO95336 258 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 IPO7O95373 1038 aaKnown RBP13.8□□□□□ -0.2
LTBR-202ENST00000440421 CSF2P04141 144 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 NME1P15531 152 aaKnown RBP13.8□□□□□ -0.2
LTBR-202ENST00000440421 JUNDP17535 347 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 FECHP22830 423 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 HNRNPKP61978 463 aaKnown RBP eCLIP13.8□□□□□ -0.2
LTBR-202ENST00000440421 EIF2B5Q13144 721 aaKnown RBP13.8□□□□□ -0.2
LTBR-202ENST00000440421 PTK2BQ14289 1009 aa13.8□□□□□ -0.2
LTBR-202ENST00000440421 ACOX1Q15067 660 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms