RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HDAC11Q96DB2 347 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 PCDHGC4Q9Y5F7 938 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 FPGTO14772 594 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 APOL1O14791 398 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 YKT6O15498 198 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 HTRA2O43464 458 aaPredicted RBP23.81■■□□□ 1.4
VARS-217ENST00000440048 MMP12P39900 470 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 RALGPS1Q5JS13 557 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 PTAR1Q7Z6K3 402 aaPredicted RBP23.81■■□□□ 1.4
VARS-217ENST00000440048 GATAD2AQ86YP4 633 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 RFX6Q8HWS3 928 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 CCNYQ8ND76 341 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 SAP25Q8TEE9 199 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 CENPTQ96BT3 561 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 ZNF830Q96NB3 372 aaPredicted RBP23.81■■□□□ 1.4
VARS-217ENST00000440048 HEY1Q9Y5J3 304 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 DUSP10Q9Y6W6 482 aa23.81■■□□□ 1.4
VARS-217ENST00000440048 SOCS5O75159 536 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 ZFXP17010 805 aaPredicted RBP23.8■■□□□ 1.4
VARS-217ENST00000440048 EPHA8P29322 1005 aaPredicted RBP23.8■■□□□ 1.4
VARS-217ENST00000440048 GRK6P43250 576 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 POLR2LP62875 67 aaKnown RBP23.8■■□□□ 1.4
VARS-217ENST00000440048 BNIP3Q12983 259 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 TAZQ16635 292 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 DAAM2Q86T65 1068 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 SLC22A18ASQ8N1D0 253 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 BAHD1Q8TBE0 780 aaPredicted RBP23.8■■□□□ 1.4
VARS-217ENST00000440048 CNTNAP3BQ96NU0 1288 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 SEMA3CQ99985 751 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 CNTNAP3Q9BZ76 1288 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 LACRTQ9GZZ8 138 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 GPR27Q9NS67 375 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 RBM22Q9NW64 420 aaKnown RBP eCLIP23.8■■□□□ 1.4
VARS-217ENST00000440048 COQ6Q9Y2Z9 468 aa23.8■■□□□ 1.4
VARS-217ENST00000440048 ARID1BQ8NFD5 2236 aaPredicted RBP23.79■■□□□ 1.4
VARS-217ENST00000440048 BTNL10A8MVZ5 291 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 ITGAVP06756 1048 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 C6P13671 934 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 CCNB1P14635 433 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 CDKN2BP42772 138 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 LIG3P49916 1009 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 VAV2P52735 878 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 ITKQ08881 620 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 TRAF2Q12933 501 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 NPNTQ6UXI9 565 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 KDM7AQ6ZMT4 941 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 DCP2Q8IU60 420 aaKnown RBP23.79■■□□□ 1.4
VARS-217ENST00000440048 CCDC13Q8IYE1 715 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 PDCD6IPQ8WUM4 868 aaKnown RBP23.79■■□□□ 1.4
VARS-217ENST00000440048 SPOCK2Q92563 424 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 CALR3Q96L12 384 aaKnown RBP23.79■■□□□ 1.4
VARS-217ENST00000440048 LGMNQ99538 433 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 C1QTNF7Q9BXJ2 289 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 POLR1EQ9GZS1 481 aaKnown RBP23.79■■□□□ 1.4
VARS-217ENST00000440048 AMACRQ9UHK6 382 aa23.79■■□□□ 1.4
VARS-217ENST00000440048 A0A1W2PQ67 120 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 PJA2O43164 708 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 IGFALSP35858 605 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 RABIFP47224 123 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 MARCKSL1P49006 195 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 DYNLT1P63172 113 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 PPIDQ08752 370 aaKnown RBP23.78■■□□□ 1.4
VARS-217ENST00000440048 RALGDSQ12967 914 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 INAVAQ3KP66 663 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 SPOCD1Q6ZMY3 1216 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 GLRX5Q86SX6 157 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 KATNAL2Q8IYT4 538 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 TP53I13Q8NBR0 393 aaPredicted RBP23.78■■□□□ 1.4
VARS-217ENST00000440048 CDC6Q99741 560 aa23.78■■□□□ 1.4
VARS-217ENST00000440048 MBNL1Q9NR56 388 aaKnown RBP23.78■■□□□ 1.4
VARS-217ENST00000440048 CPP00450 1065 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 KRT10P13645 584 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 NAP1L1P55209 391 aaKnown RBP23.77■■□□□ 1.4
VARS-217ENST00000440048 PFN3P60673 137 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 DSC2Q02487 901 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 LLGL1Q15334 1064 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 ALG1LQ6GMV1 187 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 DPPA4Q7L190 304 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 KANSL1Q7Z3B3 1105 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 KIAA1328Q86T90 577 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 KRT35Q92764 455 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 OLFM3Q96PB7 478 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 TTLL3Q9Y4R7 772 aa23.77■■□□□ 1.4
VARS-217ENST00000440048 CFAP69A5D8W1 941 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 GOLGA6L6A8MZA4 724 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 KCNK1O00180 336 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 LZTS3O60299 673 aaPredicted RBP23.76■■□□□ 1.39
VARS-217ENST00000440048 NEBLO76041 1014 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 ZRANB2O95218 330 aaKnown RBP eCLIP23.76■■□□□ 1.39
VARS-217ENST00000440048 PGLSO95336 258 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 JCHAINP01591 159 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 HLA-DQB2P05538 268 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 FOXC1Q12948 553 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 TFDP2Q14188 446 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 FZD2Q14332 565 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 IHHQ14623 411 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 PDK1Q15118 436 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 IRF4Q15306 451 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 WSCD2Q2TBF2 565 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 TPRG1LQ5T0D9 272 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms